Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1460 ATGGATGACGGTGAGCTTGATTTCCCAAACCAGGAAACGTTCCCCGGTCTAAACATGGAACAACTTCAGAGTAGTTGCTCAATGGATAGTTTCTTCGAAGAGCTTTTAAAGGACGCACATGCTTGCACGCACACTCACACTTGCAACCCTCCTGGCCCTGACAATTCACATACCCACACTTGTTATCACGTGCACACCAAAATTGTTCCAGCAACTTCTGAAGAAAAGGTTGGCACTGATGATAGTACTGGTACAGAATCTGCTGAAAAGCCAAAAAAACGTTCTTCAGGTAATCGTGAAGCAGTTCGCAAATATCGTGAGAAGAAGAAGGCACGAGCTGCATCTTTGGAGGATGAGGTTGTAAAATTGAGAGCTTTGAATCAACATTTGTTGAAGAGGTTGCAAGGTCAGTCTGCTTTAGAGGCTGAAATTGCAAGGCTAAAGTGCTTGCTAGTAGACATTCGAGGAAGGATTGATGGGGAGATTGGATCATTTCCATATCAGAAATCAACTAATTTGAACATGCCAACTGCACACTCGCCTGGTTCCTATTTGTTGAATCCTTGTAATGTGCAATGTGGTGATCAGGTCTATTGTCTTCATCCAGGAGCAGATGGCAAGAATACAGAACATATATCAACTAACGGGCAAGGATCGAATGGTTGTGAATTTGAAAGCATCCACTGCCCATCAAACCAGAATTTGGGCCTCGAGGATCTTTCTGGCTGTGGAGTTGGACAGGAAGTGTCTAATATGAATTTTTCTACAGCAAATAAAAGAAAAGGGAGAACTCGAGCAGCAAGGGCTAGTTAA 813 0.433 MDDGELDFPNQETFPGLNMEQLQSSCSMDSFFEELLKDAHACTHTHTCNPPGPDNSHTHTCYHVHTKIVPATSEEKVGTDDSTGTESAEKPKKRSSGNREAVRKYREKKKARAASLEDEVVKLRALNQHLLKRLQGQSALEAEIARLKCLLVDIRGRIDGEIGSFPYQKSTNLNMPTAHSPGSYLLNPCNVQCGDQVYCLHPGADGKNTEHISTNGQGSNGCEFESIHCPSNQNLGLEDLSGCGVGQEVSNMNFSTANKRKGRTRAARAS 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1460 270 SUPERFAMILY Leucine zipper domain 91 135 IPR046347 GO:0003700|GO:0006355
Lele46g1460 270 CDD bZIP 98 145 - -
Lele46g1460 270 Pfam Basic region leucine zipper 87 143 IPR004827 GO:0003700|GO:0006355
Lele46g1460 270 Coils Coil 99 133 - -
Lele46g1460 270 SMART brlzneu 86 153 IPR004827 GO:0003700|GO:0006355
Lele46g1460 270 Gene3D - 79 154 - -
Lele46g1460 270 PANTHER CCAAT/ENHANCER BINDING PROTEIN 2 166 - -
Lele46g1460 270 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 88 135 IPR004827 GO:0003700|GO:0006355
Lele46g1460 270 MobiDBLite consensus disorder prediction 79 104 - -
Lele46g1460 270 MobiDBLite consensus disorder prediction 72 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1460 Lele-ChrLele46 21336063 21337618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1460 1 269 bZIP Transcription Factor Family AT2G16770 60.370 1.12e-107 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele46g1460 bZIP_2 7.8e-13 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g1460 46 21336063 21337618 Lele47g0047 47 346804 347712 hybridization
Lele46g1460 46 21336063 21337618 Lele48g0050 48 1057522 1059136 hybridization