Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1391 ATGGGAGTCTACACCTCCCCTACGGTGGTTCCTGAGAACGAACTTAATCAATTTCTCGACGTTGCTAACAACGTAGCCGATGCCGCCGGAGAAATCATTCGCAAGTATTTCAGGAATAAATTTGAAGTTCACGGAATGAGTTTGGAATCTCGTCTTTGGTTTTCTATTGATTCTTCACGTGCTTCTTCACATTTAATTATGGAGAGGAAAAAAGGGCTGGAAGTGTGTAGAGAAACAAGTGCAGAGCATGTTTGGGTTTTAGATCCTATAGATGGCACAAAGAGCTTTATCACTGGGAAACCATTATTTGGTACCCTCATTGCTCTCCTGCAAAATGACAGACCAATAGTGGGCATAATTGATCAACCTGTATTGAGAGAAAGATGGATAGGGATAAGGGGCAAAGGAACTACATTAAACAGACAACAAGTATCCACACGCACTTGTGATACTCTTTCTCAAGCATACATGTACACCACAAGCCCCCATTTATTTAGTGGGGTTGCTAAAGAGGCATTTACCCGTGTTAGAACTAAGGTCTTAATTATGTATGTGCAAGATAATAAACCACAGAATGATATTCTTATATCACATAAGAACTTGAGTCTGAAGAGGGCGCTGGAGGCGTCATTACTTGAAAAGGAAATCAACTTCGTTCGTTGGCAAGCTTCTCCATTTTCATCTCCTACAAGCTTGTTTTGCTTTTCCTTATTCTTTCCCTCAAACCTCCTCACACCACCAGGAGGTTTGGTTATGGAGAAGATAGAAAAAAAACGCAGCAATTCAAGCCTCCACCACCACCACCATCATCTTCTTCAATCTTCATCCATGTCTTCACCCACCACCCTCCTCTTGTTTTTCATTCTCTCGACTTTCTCTTCCTCCATAACCCCAGCTTCCTCACAATCCCCAACCACCTCCAGATTCTCCCCAAAAGATAGTATCCTCATTGATTGTGGTGCAGATTCTCCGGCCACCTTCCCCGACGGAAGAATGTTCAAATCTGATGCAGACGCTCGCACGTACTTGAATGCCAGTGATGAGTATAAAGCCACAGATAGTCAAGCTAGGGTTTCTTCGCCTGTGTATTCTAGTTGCAGAATCTTCATGCAGGAAGCTAAGTACTCTTTCCATTTGAGCCAACCTGGTTTTCAGTGGGTTCGTCTTCATTTCTTCCCCGTTAAAGCTGAGATTTTTGATCTCCAGAAGGCCACTTTCTCTGTTAAGACAGACAAATTTGTTCTGCTTCATAGTTTTAACTTCAACAACAGTGAAAACCCTATTGTTAAAGAGTACCTCATTAATGCAACCGACAGCCTCATTTCCTTAACCTTCACGCCCCTTAAGAATTCTGCCGCTTTCATCAATGCCATCGAAGTTGTTTCAGCCCCCGACACTTTGATTGTCGACACAGGATCGGCTCTCTTCCCTGTCGGAGAATTCTCAGGTCTCACGAACTACGCCTTCCAAGCAGTTTACAGAGTCAACAATGGAGGCCCTCTGATCACATCGGCGAACGACACTCTGGGAAGAACTTGGGTTCCTGATGAGAATTTTCTCACGAACAGGGACTTAGGAAAAAGTGTTTCGGTAGCTCCAAACGTCATTAAATTCCCCGATAATCAACCCACCATGTCTCCTCTAATTGCCCCACCAACCGTATACGCATCGGCGACAGAAATGGCCGATGCACAAGTGAACCAAGCCAAGTTCAACGTGTCGTGGAAATTCGACGTGGATACAGCTTTCAGTTACCTCATAAGACTCCACTTCTGCGACATCGTGAGCAAAAGCCTGAACCAGCTATACTTCAACGTATATGTTAACCAGAAGATGGCGATTGCGAGCCTCGATTTGTCCGCCTTAACCGGAGAACTAACGACGCCGTATTACAAGGACATTGTGGTGAACGCGACGTTGATGGGGCAGGGGTTATCGATTCAGGTGGGTCCTGCGCAGTCAGATAGCGGGGACGTGAATGCGATAGTGAATGGGATTGAAGTGATGAAGATGAGCAATACGGTGAACAGCTTGGACGGAGAATTTGGGGTGGACGGTCAGAGCAGTGGGGGTTCGAACCGGGGGACGGTGGCGGCGGTTGGGTTCGCAATGATGTTCGGAGCGTTTGTGGGGTTGGGGGCGATGGTGATGAAGTGGCACAAGAGACCGCAAGATTGGCAAAGGAGAAACAGCTTCTCTTCATGGTTGCTTCCTCTTCATGCAGGTGATAATAGCTTCACGAAAAGCTCAATGGGCTCACACAAAAGCATCTTCAACTCTTCAACAATGGGGTTGGGACGTTACTTCTCCTTCGCAGAGCTCCAAGAAGCCACCAAGAACTGGGACTCTAAAGCCATTATCGGAGTTGGTGGCTTCGGTAACGTCTACCTAGGAATCATCGACGAAGGAACAAAAGTCGCCGTCAAAAGAGGAAACCCACAATCTGAACAAGGAATCAACGAGTTCCAAACTGAGATTCAAATGCTCTCAAAGCTCCGACACAGACACCTCGTTTCCCTCATCGGCTACTGCGACGAGAACGACGAGATGATCTTGGTCTACGAATACATGTCCAACGGCCCTTTCAGAGACCATCTCTACGGCAAGAATCGTCCTCCTCTCCCATGGAAACAAAGGCTGGAGATCTGCATCGGCTCGGCGCGTGGCCTTCACTATCTCCACACCGGAACCGCCCAAGGTATCATCCACCGCGACGTCAAAACCACAAACATCCTCCTCGACGATAACTTCACGGCCAAGGTATCCGATTTCGGACTCTCCAAGGACGCACCAATGGGACAGGGCCACGTCAGCACGGCGGTGAAGGGTAGTTTTGGGTATTTAGACCCCGAGTACTTCAGGCGACAGCAACTAACGGATAAATCTGATGTTTACTCTTTTGGGGTGGTTTTGTTGGAGACACTGTGTGCTAGGGCACCGTTGAATCCTCAGTTACCGAGAGAACAAGTGAACTTGGCGGATTGGGCGATGCAGTGGAAGAGAAAAGGGTTGATTGATAAGGTCATAGATCCTGCACTTGTGGGGACGATTTGCCCAGAATCGATGAACAAGTGTGCTGAAGCAGCTGAGAAGTGTTTAGCAGATTACGGAGCTGATAGGCCTTCAATGGGGGATGTTCTGTGGCATCTTGAATATGCCTTGCAGCTTCAAGAAGCTTACCTGCAAGCAAAATCCGATGATATTAATATCGCCGACCCTTTGCCTTCTCCGGCTTCCACCGCAACACCGGTAACGGCGGCGAATAATAATTCTTCTCTTCTTTCCGTTGCCCCTGCGGCGGCGGCGACGACTACAACCTCAGAACAACCACCTACTACTGTTCCTCCTCCTAACGAGCCTGCAGAAAACAAACCCATTGATGATCATTCTGGAACTGCAGTGTTTGCCCAGTTCGCTAATAACCTGAGCGGCAGGTAA 3438 0.4741 MGVYTSPTVVPENELNQFLDVANNVADAAGEIIRKYFRNKFEVHGMSLESRLWFSIDSSRASSHLIMERKKGLEVCRETSAEHVWVLDPIDGTKSFITGKPLFGTLIALLQNDRPIVGIIDQPVLRERWIGIRGKGTTLNRQQVSTRTCDTLSQAYMYTTSPHLFSGVAKEAFTRVRTKVLIMYVQDNKPQNDILISHKNLSLKRALEASLLEKEINFVRWQASPFSSPTSLFCFSLFFPSNLLTPPGGLVMEKIEKKRSNSSLHHHHHHLLQSSSMSSPTTLLLFFILSTFSSSITPASSQSPTTSRFSPKDSILIDCGADSPATFPDGRMFKSDADARTYLNASDEYKATDSQARVSSPVYSSCRIFMQEAKYSFHLSQPGFQWVRLHFFPVKAEIFDLQKATFSVKTDKFVLLHSFNFNNSENPIVKEYLINATDSLISLTFTPLKNSAAFINAIEVVSAPDTLIVDTGSALFPVGEFSGLTNYAFQAVYRVNNGGPLITSANDTLGRTWVPDENFLTNRDLGKSVSVAPNVIKFPDNQPTMSPLIAPPTVYASATEMADAQVNQAKFNVSWKFDVDTAFSYLIRLHFCDIVSKSLNQLYFNVYVNQKMAIASLDLSALTGELTTPYYKDIVVNATLMGQGLSIQVGPAQSDSGDVNAIVNGIEVMKMSNTVNSLDGEFGVDGQSSGGSNRGTVAAVGFAMMFGAFVGLGAMVMKWHKRPQDWQRRNSFSSWLLPLHAGDNSFTKSSMGSHKSIFNSSTMGLGRYFSFAELQEATKNWDSKAIIGVGGFGNVYLGIIDEGTKVAVKRGNPQSEQGINEFQTEIQMLSKLRHRHLVSLIGYCDENDEMILVYEYMSNGPFRDHLYGKNRPPLPWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKTTNILLDDNFTAKVSDFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLETLCARAPLNPQLPREQVNLADWAMQWKRKGLIDKVIDPALVGTICPESMNKCAEAAEKCLADYGADRPSMGDVLWHLEYALQLQEAYLQAKSDDINIADPLPSPASTATPVTAANNNSSLLSVAPAAAATTTTSEQPPTTVPPPNEPAENKPIDDHSGTAVFAQFANNLSGR 1145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1391 1145 SMART serkin_6 781 1053 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g1391 1145 CDD STKc_IRAK 787 1051 - -
Lele46g1391 1145 MobiDBLite consensus disorder prediction 1098 1131 - -
Lele46g1391 1145 ProSitePatterns Protein kinases ATP-binding region signature. 787 809 IPR017441 GO:0005524
Lele46g1391 1145 ProSitePatterns Inositol monophosphatase family signature 1. 85 98 IPR020583 -
Lele46g1391 1145 FunFam Receptor-like protein kinase FERONIA 488 673 - -
Lele46g1391 1145 Pfam Malectin-like domain 317 671 IPR024788 -
Lele46g1391 1145 FunFam Putative receptor-like protein kinase 314 464 - -
Lele46g1391 1145 Gene3D - 5 144 - -
Lele46g1391 1145 SUPERFAMILY Carbohydrate phosphatase 15 181 - -
Lele46g1391 1145 FunFam Receptor-like protein kinase FERONIA 857 1069 - -
Lele46g1391 1145 PRINTS Inositol monophosphatase superfamily signature 134 157 IPR000760 GO:0046855
Lele46g1391 1145 PRINTS Inositol monophosphatase superfamily signature 85 101 IPR000760 GO:0046855
Lele46g1391 1145 PANTHER OS07G0166700 PROTEIN 767 1057 IPR045272 GO:0004714|GO:0006468
Lele46g1391 1145 Pfam Inositol monophosphatase family 19 161 IPR000760 GO:0046855
Lele46g1391 1145 Pfam Protein tyrosine and serine/threonine kinase 785 982 IPR001245 GO:0004672|GO:0006468
Lele46g1391 1145 SUPERFAMILY Protein kinase-like (PK-like) 755 1052 IPR011009 -
Lele46g1391 1145 Gene3D - 314 464 - -
Lele46g1391 1145 Gene3D - 488 673 - -
Lele46g1391 1145 ProSitePatterns Serine/Threonine protein kinases active-site signature. 901 913 IPR008271 GO:0004672|GO:0006468
Lele46g1391 1145 Gene3D Phosphorylase Kinase; domain 1 743 856 - -
Lele46g1391 1145 FunFam receptor-like protein kinase FERONIA 744 856 - -
Lele46g1391 1145 Gene3D Transferase(Phosphotransferase) domain 1 857 1073 - -
Lele46g1391 1145 ProSiteProfiles Protein kinase domain profile. 781 1052 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1391 Lele-ChrLele46 20782634 20789459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1391 309 1145 Receptor kinase-like Gene Family AT4G39110 65.643 0.0 1157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele46g1391 Malectin_like 2.1e-37 CL0202