Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1387 ATGATGGCTTCCTCAAGCGGAACATCTTCAGGTTCAGGTTCGCCGTCTCTGGTTCATAACTCCGGTTCAGATGAGGATTTGCAGGTTTTGATGGATCAGAGGAAGAGGAAGAGGATGTTATCGAATCGTGAGTCAGCGAGGCGATCTCGGATGAGGAAACAGAAGCATCTGGACGATTTGGTGGCTCAAGTGGCTCATCTCAGAAAAGAGAATCAGCAGATTCTCACGAGTGTGAATCTCACAACAGAACAGTACTTAAGAGTTGAATCTGAAAACTCTGTTCTTCGAGCTCAAGCGAGTGAGCTGAGTAACAGACTGGAATCTCTGAACGAAATAATCGATTACTTGAATGCCAACAACAATGGAGGGATTTGTGATCAGAGTGAGTTGAGAGATTAA 399 0.4486 MMASSSGTSSGSGSPSLVHNSGSDEDLQVLMDQRKRKRMLSNRESARRSRMRKQKHLDDLVAQVAHLRKENQQILTSVNLTTEQYLRVESENSVLRAQASELSNRLESLNEIIDYLNANNNGGICDQSELRD 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1387 132 SUPERFAMILY Leucine zipper domain 34 86 IPR046347 GO:0003700|GO:0006355
Lele46g1387 132 CDD bZIP_plant_GBF1 35 85 IPR045314 GO:0003700|GO:0006355
Lele46g1387 132 Gene3D - 32 86 - -
Lele46g1387 132 MobiDBLite consensus disorder prediction 1 55 - -
Lele46g1387 132 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 116 - -
Lele46g1387 132 SMART brlzneu 30 94 IPR004827 GO:0003700|GO:0006355
Lele46g1387 132 MobiDBLite consensus disorder prediction 1 27 - -
Lele46g1387 132 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 32 95 IPR004827 GO:0003700|GO:0006355
Lele46g1387 132 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 37 52 IPR004827 GO:0003700|GO:0006355
Lele46g1387 132 FunFam Basic region/leucine zipper protein 32 114 - -
Lele46g1387 132 Pfam bZIP transcription factor 34 92 IPR004827 GO:0003700|GO:0006355
Lele46g1387 132 MobiDBLite consensus disorder prediction 28 55 - -
Lele46g1387 132 Coils Coil 92 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1387 Lele-ChrLele46 20750013 20750559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1387 30 125 bZIP Transcription Factor Family AT4G34590 67.327 1.57e-40 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele46g1387 bZIP_1 2.1e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g1387 46 20750013 20750559 Lele47g0118 47 871867 872429 hybridization
Lele46g1387 46 20750013 20750559 Lele48g0124 48 1595695 1596177 hybridization