Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1378 ATGGCTCCCAAGAAGGACAAGGGTCCCGCTCCGTCCTCGAAACCCGCCAAGTCTGGCGGTGGCAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAGAAAGAGAAGGTAAATAACATGGTGCTATTCGATCAGGCCACCTATGACAAGCTCCTGTCTGAGGCACCAAAATACAAGCTCATCACACCTTCAATCCTCTCTGATCGTTTGAGGATCAATGGATCACTAGCGAGGAAGGCCATTAGAGAATTAATGGCTAGAGGCTCAATCAGGATGGTATCTTCACACTCTAGTCAGCAGATCTATACTAGGGCTACAAACACCTAA 327 0.4832 MAPKKDKGPAPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGSIRMVSSHSSQQIYTRATNT 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1378 108 Pfam S25 ribosomal protein 11 105 IPR004977 -
Lele46g1378 108 FunFam 40S ribosomal protein S25 21 108 - -
Lele46g1378 108 MobiDBLite consensus disorder prediction 1 36 - -
Lele46g1378 108 Gene3D - 21 108 - -
Lele46g1378 108 PANTHER 40S RIBOSOMAL PROTEIN S25 1 108 IPR004977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1378 Lele-ChrLele46 20698492 20699979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1378 1 107 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 92.523 9.12e-55 164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g1378 46 20698492 20699979 Lele47g0130 47 935134 940728 hybridization
Lele46g1378 46 20698492 20699979 Lele48g0132 48 1651606 1655143 hybridization