Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1359 ATGAGAACGCAAGAACGTCCCCGTTTTGAGACACTCCCACGTGGCAGTCATTACCACTTAGTCCACTCACTCACTGTTTACGTTATCCACATAGCTTCTTATGTTAATATGTTGCGTTGTCTGAGAAGTTCGGAGAATCTCGCCGAGTCCTGCTCTGATATGACATTGTTAGAAAGGCAGAGAGACAGGATGAAATGGCAACAACCACAGTTTCATCATCATCAGAACCAGAGCAGCTACTTTTCTGGGAGTGGGTTTGACGGTGGCTTCTCGTCTCTGCAAGTTCCGAATTTCGGGGGGTTGAATATGCTGAATGGCAGTTTTGGCGGCGGTTCTGGGCTTGGTGAGGTGGCTGCTAATGCTGGCTCGGTGAAGCCCGACCCGGGTTGGGAAAATGGGTGGCCCGAATTGGGCAAGGTCGAGTTGCCTGGTACAGGATTCGTGTGCTCTGGATTTAATGTGAGCTCTGCAATTTCAAGGACCTCTAGCTGCCCGCCCTCTGTGGCTGCGGCGTCGGCGGCGTCGGCGGCAGCCATTACTCCGACAACAACGGAGAAGATGAGATCGACAAGTGGGAGAGAGATCTTCAAGAAGAGGAAATCTGATAAAGCTCAGATCCCCAAGGGTGTTTCAGAAAATGAGAAGAAGAAAAACAAAACAAGTGGTCAGGAAGATGATCAATCCAAAGTCACAACGGACAACAATAATAATAATGACAATAACAGAGAAATATCTGCAGAATCTTTGAAAGAGAATTCAAAAGCATCAGAGGTTCAAAATCAAAAGCCTGACTACATTCATGTGCGAGCACGTCGTGGACAAGCCACTGATAGCCATAGCTTAGCCGAAAGAGTTAGAAGGGAAAAAATTAGCGAGAGGATGAAGTACTTGCAAGGTTTAGTTCCTGGTTGTAACAAAATCGCAGGAAAAGCTGGCATGCTCGATGAAATCATCAATTATGTTCAATCTCTTCAACGACAAGTAGAGGTTAGAGATGAGACATTACCCACTTCATCATTTTCCTTTAAGTTTTTGTCAATGAAACTAGCTGCTGTAAACCCAAGGATTGAATTCAACATTGACGATATGTTTACCAAAGAGGTTTTTCCTGCTTGTGCTCCTACGAGTTTTCCAACCATAGACATGACTCCTAATCCTGCATATCTTCAGTTTGATCCAACACAACAACATGTAGCTTCATGTTCCGGATTAGATATGGGCATAATAAACCCTCCAGATTTGGGGCTTCGAAGGACCATTAGTGCCCCTGTTTCCTTGCCACACGAAACGTTTCTTGACTCATCCTGTTTCAATCAAATTCTGCCATTTTCAACCTGTGAAGGTGATTTGCAGAACCTGTACAATGTGGCTTTTGATGCCAGATCAACAACGTCGTCCTTTCCTTCTCAGCCATTCACAGGCCTAACTGAAGCTAGCAATCCAAAGATGGAGATGTTAAGAAGAAGCTGA 1470 0.451 MRTQERPRFETLPRGSHYHLVHSLTVYVIHIASYVNMLRCLRSSENLAESCSDMTLLERQRDRMKWQQPQFHHHQNQSSYFSGSGFDGGFSSLQVPNFGGLNMLNGSFGGGSGLGEVAANAGSVKPDPGWENGWPELGKVELPGTGFVCSGFNVSSAISRTSSCPPSVAAASAASAAAITPTTTEKMRSTSGREIFKKRKSDKAQIPKGVSENEKKKNKTSGQEDDQSKVTTDNNNNNDNNREISAESLKENSKASEVQNQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQGLVPGCNKIAGKAGMLDEIINYVQSLQRQVEVRDETLPTSSFSFKFLSMKLAAVNPRIEFNIDDMFTKEVFPACAPTSFPTIDMTPNPAYLQFDPTQQHVASCSGLDMGIINPPDLGLRRTISAPVSLPHETFLDSSCFNQILPFSTCEGDLQNLYNVAFDARSTTSSFPSQPFTGLTEASNPKMEMLRRS 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1359 489 Pfam Helix-loop-helix DNA-binding domain 278 325 IPR011598 GO:0046983
Lele46g1359 489 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 181 382 IPR024097 GO:0006355
Lele46g1359 489 FunFam Basic helix-loop-helix transcription factor 271 357 - -
Lele46g1359 489 Gene3D - 271 337 IPR036638 GO:0046983
Lele46g1359 489 MobiDBLite consensus disorder prediction 227 242 - -
Lele46g1359 489 MobiDBLite consensus disorder prediction 173 242 - -
Lele46g1359 489 CDD bHLH_AtBPE_like 264 363 - -
Lele46g1359 489 MobiDBLite consensus disorder prediction 190 226 - -
Lele46g1359 489 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 274 324 IPR011598 GO:0046983
Lele46g1359 489 SMART finulus 280 330 IPR011598 GO:0046983
Lele46g1359 489 MobiDBLite consensus disorder prediction 464 489 - -
Lele46g1359 489 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 272 333 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1359 Lele-ChrLele46 20618723 20621759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1359 175 454 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 42.905 3.73e-51 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele46g1359 HLH 1.9e-05 No_clan