Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1355 ATGGCGGCTGCAGATGTTGAGTTCCGCTGCTTCGTCGGTGGGCTAGCATGGGCTACCGACAACGATGCCCTCGGCAAGGCCTTTGCTCCTTTCGGCGATGTTATCGAATCGAAGATTATCAACGATCGCGAGACCGGAAGGTCCAGAGGGTTCGGATTTGTGACGTTCTCCTCAGAGCAGTCCATGAGGGATGCAATCGATAGCATGAACGGTCAGAGCCTTGATGGCCGGAACATTACGGTGAACGAAGCTCAGTCTCGTGGTGGAAGAGGCGGTTACGGCAGTGGGGGTGGTTATAGCCGTGGTGGAGGCGGACATGGAGGTGGTGGGCGCCGTGAGGGTGGATACGACAGGAATGGTGGAGGATATGGCAATGGCGCCGGTTATGGTGACCGTGGATCTCGCTACTCTCGGGGTGGTGAGTCCTATTGA 432 0.5718 MAAADVEFRCFVGGLAWATDNDALGKAFAPFGDVIESKIINDRETGRSRGFGFVTFSSEQSMRDAIDSMNGQSLDGRNITVNEAQSRGGRGGYGSGGGYSRGGGGHGGGGRREGGYDRNGGGYGNGAGYGDRGSRYSRGGESY 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1355 143 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Lele46g1355 143 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Lele46g1355 143 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 5 134 - -
Lele46g1355 143 FunFam Glycine-rich RNA-binding protein GRP1A 2 114 - -
Lele46g1355 143 Gene3D - 2 107 IPR012677 -
Lele46g1355 143 SUPERFAMILY RNA-binding domain, RBD 8 125 IPR035979 GO:0003676
Lele46g1355 143 MobiDBLite consensus disorder prediction 68 85 - -
Lele46g1355 143 MobiDBLite consensus disorder prediction 68 143 - -
Lele46g1355 143 SMART rrm1_1 9 82 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1355 Lele-ChrLele46 20595029 20595731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1355 2 90 Eukaryotic Initiation Factors Gene Family AT2G23350 31.111 1.12e-07 47.8