Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1354 ATGGTGGATCGGCGAAGCCTAGTGCCTCTTGGGTTCTTGTTCTCGTTGTTGTTTCAGTTCACATTTGAACAGATTGAGCCTCTGAGTTCAAACACAGAGCGAAATGCACTTTTCGACCTTAGATCGTCTCTGGGCTTGAGGAGCAAGGAATGGCCGAGAAAAGTTGACCCTTGCTCTCTCTGGAAGGGTGTCACGTGCGAGAATGGTCGAGTCATTGGGATCAATATTTCTGGGTTTAGAAGAACCCGTCTTGGGAAGCTAAACCCACAATTTTCAGTCCAAGCCTTGGCCAATTTAACTCTCTTGCAATCTTTCAATGCCTCCAATTTTCTGCTTCCTGGTTCAATTCCTGACTGGTTTGGCCTGCAGCTCTCATCTCTGGAAGTGCTTGATCTTCGTTCTTGCTCTGTAAATGGGGCTATTCCTTCCAGTCTGGGGAATTTAACGAACCTCACTGGTCTTTATTTATCTGATAATAATCTTACTGGTATAATCCCTGATAGTTTGGGTCAACTACTGAGCCTTTCAGTTCTTAACTTTTCGAGAAATTCTCTTTCTGGAACCATTCCAACATCGTTTGTTTCTCTTGTGAATCTTTCCTCTATTGACATTTCCACCAATTTTTTGTCTGGCTCGATTCCTCCTGGCATTGGAGCCCTCACAAGGTTACAATACTTGAATCTTTCCGGTAACAGTTTCATGGCTTCTATTCCATCTCAGCTGGGAAATTTAAGTAACTTGGTTGACCTTGATCTTAGTTTAAATTCTTTGACCGGTTTGGTGTCTCTGGAATTAAGAGGGTTGAGGAGCTTGCAGAGAATGATACTAAGTAACAACATGCTTGAAGGACCTTTGTCGGAGAACTTGTTTCCTACTTTGTCACAGTTGCAGGTTGTTGTGCTGAGGCAAAACAATTTCACCGGTGATCTGCCTGATGCGCTGTTGTCTCTGCCGAGATTGAGCTATCTCGACCTTTCTGTTAACAATTTCACTGGTATGCTTCCAAATTCTAGCTCCAATCAGAATGCGACAGCTGCTGTGCTTAATATTTCTAGTAATATGTTTTATGGAAGCCTAAATCCTATTATCAGAAGGTTCAGTGTTCTTGATCTGTCAAGCAATTATTTTGAGGGCAAGATTCTAGATTTCATGCTTAATGTATCTCTAAATACCAACTGCCTCCAAAATGTTTCAAATCAGAGGACAGCCGAAGAATGTGCGTCGTTTTATGCCGAGAGGGGCCTCACTTTTGATAATTTTGGACGCCCAAATTCAACAGGACCTCCCATGGCAAGAAGCTCTCGGAAGAGCAATAGGGATAAGATTATACTGGCTGGAGTCTTGGGTGGATTTGGTTTGTTTATTATTTTGTTGTTGCTATTGGTCTTGTTCCTTATTTGTGCTCGTAAGAGGCATAATTCAAATCAAAGAGGAAATGGCGTGGGCCCTGCTCCTGCTGGAAGCAGTCCTCCACCTCCTGGTATGTCAATCAATTTCATAAATGTGGGAGATTCATTTACAATACAACAGCTGCTTCAGGCTACAGGTGATTTCAGTGATGCAAATCTTATCAAACATGGACACTCTGGGGATCTCTTCAATGGTGTTTTGGAAAGTGGCATACCTGTAGTTATTAAAAGGATTGATGTGCTTACAACTAAAAAAGATTCTTACCTAGTGGAATTGGACTTTTTCAGTAAGATTTCTCATACTAGATTTGTTTCTCTGCTGGGTCATTGCTTAGAGAATGAGAATGAGAAGTTCCTTGTTTATAAACAAATGCCAAATGGGGACTTGTCAAATAGTTTGTATTACAAAAAGTCTACATCTGAAGATGGTACTTTGCAGTCATTGGACTGGATAACAAGGTTGAAAATTGCTATTGGAGTGGCGGAGGCCCTAACTTATCTGCATCATGAGTGTAATCCACCCTTTGTTCATAGAGATATTCAAGCAAGCAGCATACTTTTAGATGATAAATATGAAGTTCGGTTAGGTAGTCTAAGTGAAGTCTGCATCCAAGAAGGGGATAGTCATCAAAGCAAAATTACTAGGCTGCTAAGTTCGGTTAGGTCCTCTGATCCAGGCACATCTGGTTCATCTACATCAAATTGTGCCCATGATGTTTATTGCTTTGGTAAAATATTGCTTGAGTTGGTGACTGGGAAGATGGGAGTTAGTGCGATGGATGATGCTGAATTTAAGGAATGGTTGGATCAGATGCTACAATACATTAGCATTTATGACAAGGAGCTCGTAGCGAAAATGGTGGATCCATCTCTGGTTGTAGATGAGGATTTCTTAGAGGAAGTGTGGGCTATTGCTATTGTTGCAAGGTCTTGCCTAAATCCTAAACCTTCCAGAAGACCTCCAATGCGATATGTTCTCAAGGCTTTAGAAAACCCCTTTAAAGTTGTGAGGGAAGAAACCGCAGGTTCTTCCCGGCTAAGACCGACCTCTTCTAGGGGCTCCTGGAATGCTGCTTTGTTTGGTAGTTGGCGCCAGAGTTCATCCGATGTAACGGCGATCCCAGCAGTTTCTGGTACTAAAGTAGAAGGAGGGAGTAGTTTAAAGCATTCTGGAACTACCGGCTCACAGGGTAGTGGCCACAATGGCGGTGGTTCATCATCCCGGAGGCGACATTCAAACGAAATATTCCCAGAGCCATCTAACATTCATGACATAGAGAGGCCAGAGCAGGAATAG 2706 0.425 MVDRRSLVPLGFLFSLLFQFTFEQIEPLSSNTERNALFDLRSSLGLRSKEWPRKVDPCSLWKGVTCENGRVIGINISGFRRTRLGKLNPQFSVQALANLTLLQSFNASNFLLPGSIPDWFGLQLSSLEVLDLRSCSVNGAIPSSLGNLTNLTGLYLSDNNLTGIIPDSLGQLLSLSVLNFSRNSLSGTIPTSFVSLVNLSSIDISTNFLSGSIPPGIGALTRLQYLNLSGNSFMASIPSQLGNLSNLVDLDLSLNSLTGLVSLELRGLRSLQRMILSNNMLEGPLSENLFPTLSQLQVVVLRQNNFTGDLPDALLSLPRLSYLDLSVNNFTGMLPNSSSNQNATAAVLNISSNMFYGSLNPIIRRFSVLDLSSNYFEGKILDFMLNVSLNTNCLQNVSNQRTAEECASFYAERGLTFDNFGRPNSTGPPMARSSRKSNRDKIILAGVLGGFGLFIILLLLLVLFLICARKRHNSNQRGNGVGPAPAGSSPPPPGMSINFINVGDSFTIQQLLQATGDFSDANLIKHGHSGDLFNGVLESGIPVVIKRIDVLTTKKDSYLVELDFFSKISHTRFVSLLGHCLENENEKFLVYKQMPNGDLSNSLYYKKSTSEDGTLQSLDWITRLKIAIGVAEALTYLHHECNPPFVHRDIQASSILLDDKYEVRLGSLSEVCIQEGDSHQSKITRLLSSVRSSDPGTSGSSTSNCAHDVYCFGKILLELVTGKMGVSAMDDAEFKEWLDQMLQYISIYDKELVAKMVDPSLVVDEDFLEEVWAIAIVARSCLNPKPSRRPPMRYVLKALENPFKVVREETAGSSRLRPTSSRGSWNAALFGSWRQSSSDVTAIPAVSGTKVEGGSSLKHSGTTGSQGSGHNGGGSSSRRRHSNEIFPEPSNIHDIERPEQE 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1354 901 Pfam Protein tyrosine and serine/threonine kinase 524 741 IPR001245 GO:0004672|GO:0006468
Lele46g1354 901 SMART LRR_typ_2 317 340 IPR003591 -
Lele46g1354 901 SMART LRR_typ_2 148 171 IPR003591 -
Lele46g1354 901 SMART LRR_typ_2 220 243 IPR003591 -
Lele46g1354 901 SMART LRR_typ_2 244 267 IPR003591 -
Lele46g1354 901 SMART LRR_typ_2 172 195 IPR003591 -
Lele46g1354 901 SMART LRR_typ_2 268 292 IPR003591 -
Lele46g1354 901 FunFam Leucine-rich repeat receptor protein kinase EMS1 190 288 - -
Lele46g1354 901 Gene3D Ribonuclease Inhibitor 29 189 IPR032675 -
Lele46g1354 901 Gene3D Phosphorylase Kinase; domain 1 496 592 - -
Lele46g1354 901 MobiDBLite consensus disorder prediction 848 901 - -
Lele46g1354 901 FunFam Predicted protein 488 593 - -
Lele46g1354 901 MobiDBLite consensus disorder prediction 881 901 - -
Lele46g1354 901 FunFam Putative LRR receptor-like serine/threonine-protein kinase 594 819 - -
Lele46g1354 901 Pfam Leucine rich repeat 150 207 IPR001611 GO:0005515
Lele46g1354 901 PANTHER RECEPTOR-LIKE PROTEIN 55 296 801 - -
Lele46g1354 901 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 292 422 - -
Lele46g1354 901 Pfam Leucine rich repeat N-terminal domain 31 66 IPR013210 -
Lele46g1354 901 MobiDBLite consensus disorder prediction 853 880 - -
Lele46g1354 901 MobiDBLite consensus disorder prediction 474 493 - -
Lele46g1354 901 SUPERFAMILY L domain-like 91 408 - -
Lele46g1354 901 Gene3D Transferase(Phosphotransferase) domain 1 594 814 - -
Lele46g1354 901 SUPERFAMILY Protein kinase-like (PK-like) 493 799 IPR011009 -
Lele46g1354 901 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 30 189 - -
Lele46g1354 901 ProSiteProfiles Protein kinase domain profile. 518 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g1354 901 Gene3D Ribonuclease Inhibitor 190 288 IPR032675 -
Lele46g1354 901 Gene3D Ribonuclease Inhibitor 289 393 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1354 Lele-ChrLele46 20575526 20580304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1354 32 687 Miscellaneous Gene Families AT2G16250 57.704 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Lele46g1354 PK_Tyr_Ser-Thr 4.6e-21 CL0016