Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1351 ATGTCAACCATCTCCGACCATTCCTCCGGCAACTTTCTTCAGCATGAACTCACCAAGAGCACCCCTTTTCTGGGTTTAGAACTCTACATCGTTATTTGCGTTTTCCTCTTCATCTTCGTCTTTCTTGCGCTTCTGATCTTCCTCTGCATTCGCCGGAATCGAAGCTCCCCGAGGCCCAGTACGCTAGCCAGCCAAAGATCCGGCGTGATTCCGTTGGTCTCCAAGGAGATCGTGGAGGTCGAAGCCTTGGATCTTCTTGGTATCGAAGAGAAAAAGCTTAAGGTTGAAGGTCGTGATCTGAGGAGGAAGAAGCAGGGGGAAGACGACGAGGAGATCAATGTTGGATTTCGCAGAGGAAAACAGAGGAACGATGAGAGTGATGTCGTCGACGGCCTGAAGATAGGGTGGGGCCGTTGGTACAGCTTGGAGGAGCTTAAGATTGCGACACGTGGATTCGCCGACGAGAATGTGATCGGAGAAGGTGGTTATGGAATTGTATACAGAGGAATTCTTCCAGATGGTTCTGTAGTTGCTGTGAAGAAACTTCTTAACAACAAGGGTCAAGCAGGGAAGGAGTTTAAGGCGGAGGTTGAAGCTATTGGAAAAGTAAAGCATAAAAATTTAGTTGGCTTAATAGGATATTGTGCAGAAGGTGCTCAAAGGATTCTTGTTTACGAATATGTTGAGAATGGAAACTTGGAGCAGTGGTTGCATGGTGAGGTAGTGCCTGCTAGCCCCTTAACTTGGGACATACGTATGAGGATCGCCATAGGGACGGCAAAAGGACTAGCCTATTTGCATGAAGGGCTAGAACCCAAAGTTGTGCACCGAGATGTGAAATCTAGTAACATTCTTCTCGACAAAAGATGGAACGCCAAGGTATCGGACTTTGGACTGGCCAAACTCTTAGGACCCGAGAAAAGCTACGTGTCTACACGCGTAATGGGGACATTCGGATATGTTTCGCCTGAGTATGCGAGCACAGGTATGCTTAATGAAGGTAATGATGTGTACAGTTTTGGAGTTCTGCTGATGGAGATAATCACCGGAAGAAGTCCCATTGATTATTCTAGATCGCCAGCTGAGATGAACTTGGTTGATTGGTTCAAGGGAATGGTGGCGAGTCGTCGTGGGGATGAGCTAGTAGATCCTTCGATTGAGATTAAGCCCTCTCCGAGATCACTGAAACGAGCTTTGCTGGTTTGTCTGCGCTGCATAGATATGGATGTCTGTAAGCGGCCAAAGATGAGTCAAATAGTTCATATGCTTGAGGCAGATGATTTTCCCTTTCGTTCTGAACTTCGGGCAGCTAGAGAGAAAGATCCTGTTCCATCTGTTTCCAGCAAAATTTCATATCCACCAAAGCATTTGGAGTCAGTTGAGAGATCAAGATGGCGATGA 1401 0.469 MSTISDHSSGNFLQHELTKSTPFLGLELYIVICVFLFIFVFLALLIFLCIRRNRSSPRPSTLASQRSGVIPLVSKEIVEVEALDLLGIEEKKLKVEGRDLRRKKQGEDDEEINVGFRRGKQRNDESDVVDGLKIGWGRWYSLEELKIATRGFADENVIGEGGYGIVYRGILPDGSVVAVKKLLNNKGQAGKEFKAEVEAIGKVKHKNLVGLIGYCAEGAQRILVYEYVENGNLEQWLHGEVVPASPLTWDIRMRIAIGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKRWNAKVSDFGLAKLLGPEKSYVSTRVMGTFGYVSPEYASTGMLNEGNDVYSFGVLLMEIITGRSPIDYSRSPAEMNLVDWFKGMVASRRGDELVDPSIEIKPSPRSLKRALLVCLRCIDMDVCKRPKMSQIVHMLEADDFPFRSELRAAREKDPVPSVSSKISYPPKHLESVERSRWR 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1351 466 Gene3D Phosphorylase Kinase; domain 1 120 227 - -
Lele46g1351 466 MobiDBLite consensus disorder prediction 438 466 - -
Lele46g1351 466 SUPERFAMILY Protein kinase-like (PK-like) 137 431 IPR011009 -
Lele46g1351 466 Pfam Protein kinase domain 153 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g1351 466 SMART serkin_6 152 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g1351 466 Gene3D Transferase(Phosphotransferase) domain 1 228 434 - -
Lele46g1351 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 274 286 IPR008271 GO:0004672|GO:0006468
Lele46g1351 466 FunFam Probable serine/threonine-protein kinase At1g01540 132 227 - -
Lele46g1351 466 ProSitePatterns Protein kinases ATP-binding region signature. 158 181 IPR017441 GO:0005524
Lele46g1351 466 PANTHER OS01G0323000 PROTEIN 9 440 - -
Lele46g1351 466 CDD STKc_IRAK 158 424 - -
Lele46g1351 466 FunFam Putative receptor-like serine/threonine-protein kinase 228 438 - -
Lele46g1351 466 ProSiteProfiles Protein kinase domain profile. 152 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1351 Lele-ChrLele46 20563181 20565909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1351 110 426 Trihelix Transcription Factor Family AT1G70460 46.483 2.87e-89 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lele46g1351 Pkinase 9.5e-46 CL0016