Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1330 ATGAGCTTTGTTGGGTCTGGTTTTTTGTTGTTACAGGCCAAGCCTAGGGTGCCACGTCAGCCTGTGAGTCCTTCGTCTGCTCCAGTAAGAAGGTCTAGTCGATTAGCCAACTTACCTCCTCCAAACTACAAGGAAGTTAGTCTTTCTTTAATGGCTTCCTGCTTTTTATTTCAATTAGTTTTTGGTGCAAATATTGAAGTTTTTGATGGGGATTGTTTTTGTTCTTGCAAGGTCGGCATTGAAGATGAAGTTAGGCAATATGCAATTGATAGAGCTGAAGAACTTCTCTCTGGTTTAGATTCTAAATACCCAAGTTTCATCAAGCCTATGCTCCAATCACATGTCACTGGAGGATTTTGGCTTGGTCTTCCAGTTCATTTCTGCAAAACTCATCTTCATCACCATGATGAAACAATAACTCTAATAGATGAGGATGGGAACGAGTCTCCTACCAAATACCGTGCTGATAAAACTGGTCTTAGTGGTGGTTGGCGAGGTTTCTCAATTGATCATGAACTATTTGATGGGGATGCATTGGTGTTTCAATTGATCAAACCCACAAAATTTAAGGTGTTCATAATTAGAGCATATGAATCAGAAAACAAAGAGGAAGGAGATGAAGATTTGGATGCTCCACACTTGAACAGGAGCTCTAAAAGAGTCAGAGCAAGTGCTGATTATGATGAACATGGAGAGGACGAATCTTGA 708 0.404 MSFVGSGFLLLQAKPRVPRQPVSPSSAPVRRSSRLANLPPPNYKEVSLSLMASCFLFQLVFGANIEVFDGDCFCSCKVGIEDEVRQYAIDRAEELLSGLDSKYPSFIKPMLQSHVTGGFWLGLPVHFCKTHLHHHDETITLIDEDGNESPTKYRADKTGLSGGWRGFSIDHELFDGDALVFQLIKPTKFKVFIIRAYESENKEEGDEDLDAPHLNRSSKRVRASADYDEHGEDES 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1330 235 CDD B3_DNA 104 195 IPR003340 GO:0003677
Lele46g1330 235 Gene3D - 82 199 IPR015300 -
Lele46g1330 235 MobiDBLite consensus disorder prediction 201 229 - -
Lele46g1330 235 ProSiteProfiles B3 DNA-binding domain profile. 106 197 IPR003340 GO:0003677
Lele46g1330 235 MobiDBLite consensus disorder prediction 201 235 - -
Lele46g1330 235 SUPERFAMILY DNA-binding pseudobarrel domain 99 196 IPR015300 -
Lele46g1330 235 SMART B3_2 106 198 IPR003340 GO:0003677
Lele46g1330 235 Pfam B3 DNA binding domain 106 193 IPR003340 GO:0003677
Lele46g1330 235 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 81 201 IPR044837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1330 Lele-ChrLele46 20424181 20426183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1330 13 218 B3 DNA Binding Superfamily AT3G19184 49.763 2.30e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele46g1330 B3 2.6e-14 CL0405