Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1320 ATGGGTGTTTGTGTCTCTAAGCCACAGAAGCCGAACCCATATGCAGTTAGGCAAACGGAAGAAGACCATCATGATCGGTATGAAGATTCTTCTCAAATCCCGAAATCCCCGCTTTCTCCAATCACCAACAACTACCACCGGGAAGATGACGTCACTACCGGAAAGCAATCTCCGTTCTTCCCCTTCTACAGTCCTAGTCCAGCTCATTTCCTAAAAAATTCTCCGGCATCGACGCCGGGAGGGAGCAAGAGCGCGAGTTCCACGCCAAGGAGGTTCTTCCGGCGGCCTTTTCCTCCACCATCGCCGGCCAAGCACATGAAGGCCGTGCTGGCGAGGAGGCAGGGGAGGAAGAGGGCGACAGCGATACCCGAAGAGAGGGAGGATGAAGAATCAAGAGATTTGGACAAGAGGTTTGGGTTTTCGATGAAATTCACCAGTAGCTTGGAGATGGGGGAAGAAGTAGGCAGAGGGCATTTTGGTTACACGTGCTCTGCTAGGTTTAAGAAAGGTGAACGTAAGGGTCAACAAGTGGCAGTGAAGGTCATTCCTAAAACTAAGATGACAACAGCAATTGCAATTGAAGATGCTAGAAGAGAGGTTAAAATATTACGAGCCTTGACCGGACACAACAATCTGGTTCAATTCTATGATGCATTTGAAGACCAAGATAATGTCTACATTGTAATGGAGTTATGTGAAGGAGGCGAGCTGTTAGATAGAATACTTTCAAGAGGAGGGAAATACTCAGAAGATGACGCCAAAGCTATCATTATACAAATACTGAATGTTGTCGCGTTCTGTCATCTTCAGGGTGTGGTGCACAGAGATCTTAAACCAGAGAATTTTTTGTATGTTTCAAAGGATGAGAACGCTGAATTAAAAGCTATCGACTTTGGATTATCAGACTTCGTCAAACCAGATGAAAGGCTCAATGATATCGTGGGTAGTGCATACTATGTGGCCCCTGAAGTTCTACATAGATCTTACGGCACAGAAGCTGATGTGTGGAGTATCGGCGTGATAGCATATATTCTCTTATGTGGTAGCCGTCCATTTTGGGCGCGAACCGAGTCCGGCATATTTAGGGCTGTTCTCAAAGCTGATCCAAGCTTTGATGAACCTCCTTGGCCATCATTATCTTCAGAAGCAAAAGATTTCGTTAAGCGCCTGTTGAATAAGGACCCAAGGAAGCGAATATCAGCTGCTCAGGCTCTAAGTCATCCTTGGATTAGGAATTTCAACAACGTAAAAGTTCCTCTTGATATTTTAATATTTAAGCTCATGAAGGCTTATATGCGATCATCATCTTTGCGCAAGGCTTCTTTAAGGGCATTGTCAAAGACATTGACCGCTGATGAGCTCTATTATCTGAAGGAGCAATTTGCTCTGCTGGAGCCAAGCAAAAATGGCAGTGTAACATTAGATAACATCAAAATGGCGCTGATGAAACACGCAACAGATGCCATGAAGGAGTCCCACATTTCTGATTTTCTTGCCTCGCTAAATTCATTACAGTATAGAAGAATGGGTTTCGAAGAATTTTGTGCGGCCGCATTAAGCGTGCATCAGCTTGAAGCTCTTGATCGTTGGGAACAACATGCTCGCTGCGCATATGAAATTTTTGAGAAAGATGGAAACAGAGCTATTGTCATTGAAGAACTTGCTTCGGAACTTGGACTTGGGCCTTCAATCCCGGTCTATGTAGTACTCGTGGATTGGATAAGGCACACTGATGGGAAGCTAAGCTTTCTTGGGTTTGTCAAATTGTTACATGGTGCATCTCCCCGGACTCTTTCAAAGGGGAAATAG 1809 0.4494 MGVCVSKPQKPNPYAVRQTEEDHHDRYEDSSQIPKSPLSPITNNYHREDDVTTGKQSPFFPFYSPSPAHFLKNSPASTPGGSKSASSTPRRFFRRPFPPPSPAKHMKAVLARRQGRKRATAIPEEREDEESRDLDKRFGFSMKFTSSLEMGEEVGRGHFGYTCSARFKKGERKGQQVAVKVIPKTKMTTAIAIEDARREVKILRALTGHNNLVQFYDAFEDQDNVYIVMELCEGGELLDRILSRGGKYSEDDAKAIIIQILNVVAFCHLQGVVHRDLKPENFLYVSKDENAELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRSYGTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEPPWPSLSSEAKDFVKRLLNKDPRKRISAAQALSHPWIRNFNNVKVPLDILIFKLMKAYMRSSSLRKASLRALSKTLTADELYYLKEQFALLEPSKNGSVTLDNIKMALMKHATDAMKESHISDFLASLNSLQYRRMGFEEFCAAALSVHQLEALDRWEQHARCAYEIFEKDGNRAIVIEELASELGLGPSIPVYVVLVDWIRHTDGKLSFLGFVKLLHGASPRTLSKGK 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1320 602 Pfam Protein kinase domain 150 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g1320 602 Gene3D Transferase(Phosphotransferase) domain 1 238 433 - -
Lele46g1320 602 MobiDBLite consensus disorder prediction 32 47 - -
Lele46g1320 602 MobiDBLite consensus disorder prediction 16 31 - -
Lele46g1320 602 FunFam CDPK-related kinase 3 141 312 - -
Lele46g1320 602 Gene3D - 434 592 - -
Lele46g1320 602 SUPERFAMILY Protein kinase-like (PK-like) 144 446 IPR011009 -
Lele46g1320 602 ProSitePatterns Protein kinases ATP-binding region signature. 154 180 IPR017441 GO:0005524
Lele46g1320 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Lele46g1320 602 FunFam CDPK-related kinase 1 141 236 - -
Lele46g1320 602 SUPERFAMILY EF-hand 442 591 IPR011992 -
Lele46g1320 602 MobiDBLite consensus disorder prediction 117 132 - -
Lele46g1320 602 MobiDBLite consensus disorder prediction 70 89 - -
Lele46g1320 602 MobiDBLite consensus disorder prediction 1 132 - -
Lele46g1320 602 CDD STKc_CAMK 149 409 - -
Lele46g1320 602 FunFam CDPK-related kinase 1 446 519 - -
Lele46g1320 602 PANTHER SERINE/THREONINE-PROTEIN KINASE 131 570 - -
Lele46g1320 602 ProSiteProfiles Protein kinase domain profile. 148 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g1320 602 SMART serkin_6 148 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g1320 602 Gene3D Phosphorylase Kinase; domain 1 150 237 - -
Lele46g1320 602 FunFam Calcium-dependent protein kinase SK5 320 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1320 Lele-ChrLele46 20346728 20350585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1320 1 598 EF-hand Containing Proteins AT3G50530 69.457 0.0 903
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele46g1320 Pkinase 4.5e-72 CL0016