Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1316 ATGGTGGTGCCACTTCTGAGATTAACCAATGAGTTCAATCAGACATTCCTTCATGATGCTTTGCACACAAAGCATTACTATATTGGAAGAAATCAAACCATGGCTTGTTCTGATTCTTACAGATTCATCGTCTCCCACCTCAGTCTCTTCGTTTTCGTCTATGTTTTCTCGTGTCCCCTTAGGGTTCATATGTTTCCATATAGAAATGGTTATTATAATTATGCTCCTCAAGCATATAATAATGTACCTGGTGGAACCCTAGAGAACCAACTAGATTACAACTTCTACGACAGAACATGCCCTAACTTGCTCATGATTGTTCGTTCTAATGTCTGGTCTGCCATCCGAACCGATCCCAGGATGGCTGCCTCCCTCCTTCGTCTTCACTTCCATGACTGTATTGTTGATGGATGCGATGGGTCAGTGCTGCTGGATGACACAGAGGAAATGAAAGGGGAAAAGAAGGCAGGCCCCAATCTGAATTCTGTTCGAGGCTTTCAAGTCATTGACGCCATTAAAGCCGACCTCGAAAGCTCCTGTCCCTCCACTGTGTCCTGCGCTGACATCCTTGCCCTCGCCGCCCGAGAAGCTGTCCTTCAGGCTGGAGGACCACCTTGGGCCGTGGGATTAGGACGAAGAGATTCGGTGAGTGCAAGTATGGACGCAGCCAATGAGCAGATCCCCACTCCTTTCGAGTCCCTCCCTAACATCACTGCCAAGTTCACCTCCAAGGGTCTCCACCTCTGGGACGTCGTTGTCCTCTCAGGAGGGCACACGATTGGGTTTGCACAGTGTTTTACGTTTAAAGGGAGGCTGTTCGACTTCAAAGGGTCGGGCAAACCCGATCCAGATATGGATTCGGTGCTGCTGTCGGGTTTGCAGAGAAGGTGTCCAAACCGGAACTCCTCCAACGCAAACCTGGCTCCTCTGGATGCAGCTTCCTTCTCCAGATTCGACAACGCTTATTACAGCAATCTGCTAAAGAACACGGGCCTCCTCCAATCTGATCAAATTCTCAGTTCCGATCCCACCACTGCCAATCTGGTGAATTACTACAGTCAGAACCAGTTCGCCTTCTTCAACGACTTCGCCGCCTCCATGGTTAAGCTCAGCAGTGTCGGAGTTCTTACAGGCAACGAGGGCCAAGTTAGACTCAAGTGTGGCTCTGTTAATCCATATTAA 1182 0.4907 MVVPLLRLTNEFNQTFLHDALHTKHYYIGRNQTMACSDSYRFIVSHLSLFVFVYVFSCPLRVHMFPYRNGYYNYAPQAYNNVPGGTLENQLDYNFYDRTCPNLLMIVRSNVWSAIRTDPRMAASLLRLHFHDCIVDGCDGSVLLDDTEEMKGEKKAGPNLNSVRGFQVIDAIKADLESSCPSTVSCADILALAAREAVLQAGGPPWAVGLGRRDSVSASMDAANEQIPTPFESLPNITAKFTSKGLHLWDVVVLSGGHTIGFAQCFTFKGRLFDFKGSGKPDPDMDSVLLSGLQRRCPNRNSSNANLAPLDAASFSRFDNAYYSNLLKNTGLLQSDQILSSDPTTANLVNYYSQNQFAFFNDFAASMVKLSSVGVLTGNEGQVRLKCGSVNPY 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1316 393 Pfam Peroxidase 107 355 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele46g1316 393 CDD secretory_peroxidase 90 390 IPR033905 GO:0004601|GO:0042744
Lele46g1316 393 ProSitePatterns Peroxidases active site signature. 122 133 IPR019794 GO:0004601
Lele46g1316 393 Gene3D Peroxidase, domain 2 228 370 - -
Lele46g1316 393 PRINTS Plant peroxidase signature 249 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele46g1316 393 PRINTS Plant peroxidase signature 183 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele46g1316 393 PRINTS Plant peroxidase signature 100 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele46g1316 393 PRINTS Plant peroxidase signature 309 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele46g1316 393 PRINTS Plant peroxidase signature 124 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele46g1316 393 PRINTS Plant peroxidase signature 365 378 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele46g1316 393 PRINTS Plant peroxidase signature 202 217 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele46g1316 393 PRINTS Plant peroxidase signature 164 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele46g1316 393 PRINTS Plant peroxidase signature 325 342 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele46g1316 393 Gene3D - 94 391 - -
Lele46g1316 393 PRINTS Haem peroxidase superfamily signature 184 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele46g1316 393 PRINTS Haem peroxidase superfamily signature 122 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele46g1316 393 PRINTS Haem peroxidase superfamily signature 311 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele46g1316 393 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele46g1316 393 PRINTS Haem peroxidase superfamily signature 202 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele46g1316 393 FunFam Peroxidase 228 370 - -
Lele46g1316 393 ProSiteProfiles Plant heme peroxidase family profile. 90 391 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele46g1316 393 FunFam Peroxidase 94 239 - -
Lele46g1316 393 PANTHER PEROXIDASE 72-RELATED 88 389 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele46g1316 393 ProSitePatterns Peroxidases proximal heme-ligand signature. 250 260 IPR019793 -
Lele46g1316 393 SUPERFAMILY Heme-dependent peroxidases 90 392 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1316 Lele-ChrLele46 20319565 20322468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1316 47 388 Peroxidase AT1G49570 59.366 1.08e-143 410