Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1309 ATGGCTAAGCTATATTCAAAGCAAGCCTTAGGCTGCTTCATCTTTAGCTCCTTCATCATATCTTCTCTCTCACATTTTCTTCCATCAATCCCATCAATCCCAGAGGATAGCGATGTTTCATTAGGTCTTAATTTTGATATCCAAGTTGATGCCAATTTAACTTTTGAACATGAAAGGCTTAAACACGCCTACGTTGCTCTCCAGGCATGGAAAACTGCCATATACTCTGACCCTTTGAACACACTTGACAATTGGGTGGGTTCTGATGTATGTTCTTATAATGGTGTGTTCTGTGCTGAAGCTCTTGATGATCCTAAATTAAATGTTGTTGCTGGCATTGATCTCAACCATGCCGACATTGCCGGGCGTCTTGTACCAGAGTTAGGGCTCTTGACAGACATGGCTCTTTTCCATATCAACTCTAATAGGTTTTGTGGGATCGTCCCAGAGAGCTTTAAGAATCTCACTCTCATGTTTGAGTTTGATATTAGCAACAATGGATTTGTTGGCGTTTTCCCTTCTGTTGTCCTTACATGGCCAAACATAAAGTACCTGGATCTTAGGTATAATGATTTTGAAGGACCTTTGCCTTCACAACTGTTTGAGAAAGATATTGATGCATTGTTCTTGAACAATAATCGTTTCACTTCCACCATCCCAGAAACCCTAGGGAACTCCTCCGTCTCTGTTGTGACATTTGCTAACAACAAGTTCACAGGTTGCATTCCAAAATCAATTGGCAACATGGTGAACTTGAATGAGATTGTTTTCTTAGGCAATGATCTCGGAGGTTGCTTCCCACAAGAGATTGGATTGTTAGGAAATGTGACAATTTTAGATGTTAGCCATAATGGTTTTGTTGGGACTTTGCCAAACTTGTCAGGTTTGAAGAATGTGGAGGTAATAGACATTGCACATAATAAGATTTCTGGGTATGTGTCGGACACCATTTGCCAGCTACCGAGGTTGACCAAATTCACATTCTCTGGCAATTACTTCAATGGAGAAGCTCAATCTTGTACACCATCTTTAAGAGCAAATGTTGTTTTCGATGACAGTAATAATTGTTTGCCATTAAGGTCAGATCAAAAGACAAGCAAGCAATGTCTCCCGGTGGTGACTCGCCCTATAGATTGTAGTAAGAGCTGTGGGAGTGGTGGCAACAACCATACCCCATCAACACCTGAAACACCAAAGGTAGAGCCTCCGGTTCATTCTCCCCCACACCCAGTCCAGTCTCCACCACCACCCGTATTCTCTCCTCCGCCCCCAGTTCACTCTCCTCCACCGCCAGTCCAATCTCCACCACCGCCAGTGTTCTCTCCTCCTCCGCCTTCCCCTGTGTTCTCTCCTCCACCCCCAGTTCACTCTCCTCCGCCTCCAGTCCAGTCTCCACCACCCGTGTTCTCTCCTCCCCCTCCAGTCCAATCTCCACCACCCCCACTATTTGAAAACCACTCAGAACGGAACCAACCACCCCAACTTGAAGCAGCAGAAGAAGCCATGGGAGAGGTTGACCCAGCTTTCATTCAAGCCCCAGAACACAGGCCTAATCTCTCCATCATCGCCGAAGCTGAAGGAATTCCGGTGATTGACCTTTCTCCGATCCACCAACACTTTGAAAACGACACCGTTTCAGACCCGTCTGCCATTGAAGGTGTCGTGAAAGAGATAGGCAGAGCATGCAAGGAATGGGGCTTCTTCCAAGTTACCAATCATGAGGTTCCTCTGAATCTCAGACAGAGAGTCGAGGATGTTTCAAGAAAGTTTTTTTCGCTGAATTCGGAGGAGAAGAGGAAGGTCGCCAGAGAACAAAGTTTGCCTGGTTATTACGACTCAGAGCACACCAAAAACGTCAGAGACTGGAAGGAGGGAATTGATTTTCTGGCTAAAGAACCCACTCTCGTCCCTATCTCCGGTGATGATGACGATGATCGAACCACTCAATGGACTAATCGCTACCCTCAAAACCCTCCAGAACTAAGAGGGACAGTTGTGGAGTATATTGAAGAGATGGAGAAGCTAGCATTTAAGATGTTGGAGCTGATAGCTCTGAGCTTGGGGTTGGAATCAAGGAGATTTCATGGCTATTACCTTAAAGATCAGAGCAGCTTTATGCGATTCAATCACTATCCTGCTTGTCCTACGCCTCACTTGGCCCTCGGAGTTGGACGACACAAGGACCCTGGTGCCCTAACAATTCTTGCTCAAGATGAGGTGGAAGGACTCGAAGTCAGACGCAAATCAGATGAACAATGGATCAGAGTCAAACCCACCCCACAAGCTTTCATCATCAACATTGGTGATGTCGTTCAGGTTTGGAGCAATGATGAGTATGAGAGTGTGGAGCACAGGGTGATTGTGAACTGTGAGAAGGAGAGGTTTTCAATTCCCTTCTTCTTCAACCCTGCACATTACACCATTGTTGAGCCTTTGAAGGAGCTGATTAATCAACATAACCCTTCAAAATATAGGCCCTATAATTTTGGCAAGTATCTTGTCAAGAGAAAGGACAGCAATTTCCAGAAACTGAACATGGAAAACATTCAAATTTCTCATTTCAGGCTGCCTTAA 2574 0.4514 MAKLYSKQALGCFIFSSFIISSLSHFLPSIPSIPEDSDVSLGLNFDIQVDANLTFEHERLKHAYVALQAWKTAIYSDPLNTLDNWVGSDVCSYNGVFCAEALDDPKLNVVAGIDLNHADIAGRLVPELGLLTDMALFHINSNRFCGIVPESFKNLTLMFEFDISNNGFVGVFPSVVLTWPNIKYLDLRYNDFEGPLPSQLFEKDIDALFLNNNRFTSTIPETLGNSSVSVVTFANNKFTGCIPKSIGNMVNLNEIVFLGNDLGGCFPQEIGLLGNVTILDVSHNGFVGTLPNLSGLKNVEVIDIAHNKISGYVSDTICQLPRLTKFTFSGNYFNGEAQSCTPSLRANVVFDDSNNCLPLRSDQKTSKQCLPVVTRPIDCSKSCGSGGNNHTPSTPETPKVEPPVHSPPHPVQSPPPPVFSPPPPVHSPPPPVQSPPPPVFSPPPPSPVFSPPPPVHSPPPPVQSPPPVFSPPPPVQSPPPPLFENHSERNQPPQLEAAEEAMGEVDPAFIQAPEHRPNLSIIAEAEGIPVIDLSPIHQHFENDTVSDPSAIEGVVKEIGRACKEWGFFQVTNHEVPLNLRQRVEDVSRKFFSLNSEEKRKVAREQSLPGYYDSEHTKNVRDWKEGIDFLAKEPTLVPISGDDDDDRTTQWTNRYPQNPPELRGTVVEYIEEMEKLAFKMLELIALSLGLESRRFHGYYLKDQSSFMRFNHYPACPTPHLALGVGRHKDPGALTILAQDEVEGLEVRRKSDEQWIRVKPTPQAFIINIGDVVQVWSNDEYESVEHRVIVNCEKERFSIPFFFNPAHYTIVEPLKELINQHNPSKYRPYNFGKYLVKRKDSNFQKLNMENIQISHFRLP 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1309 857 Pfam non-haem dioxygenase in morphine synthesis N-terminal 528 656 IPR026992 -
Lele46g1309 857 Gene3D Ribonuclease Inhibitor 62 362 IPR032675 -
Lele46g1309 857 SUPERFAMILY L domain-like 65 356 - -
Lele46g1309 857 SUPERFAMILY Clavaminate synthase-like 500 840 - -
Lele46g1309 857 MobiDBLite consensus disorder prediction 396 481 - -
Lele46g1309 857 PRINTS Proline rich extensin signature 431 447 - -
Lele46g1309 857 PRINTS Proline rich extensin signature 450 467 - -
Lele46g1309 857 PRINTS Proline rich extensin signature 410 431 - -
Lele46g1309 857 PRINTS Proline rich extensin signature 396 408 - -
Lele46g1309 857 Pfam 2OG-Fe(II) oxygenase superfamily 705 803 IPR044861 -
Lele46g1309 857 MobiDBLite consensus disorder prediction 637 656 - -
Lele46g1309 857 FunFam Gibberellin 20 oxidase 1 502 842 - -
Lele46g1309 857 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 24 511 - -
Lele46g1309 857 FunFam Leucine-rich repeat extensin-like protein 1 64 225 - -
Lele46g1309 857 MobiDBLite consensus disorder prediction 380 489 - -
Lele46g1309 857 Gene3D - 495 842 IPR027443 -
Lele46g1309 857 MobiDBLite consensus disorder prediction 381 395 - -
Lele46g1309 857 Pfam Leucine rich repeat N-terminal domain 65 98 IPR013210 -
Lele46g1309 857 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 702 803 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1309 Lele-ChrLele46 20267839 20272722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1309 1 400 Trihelix Transcription Factor Family AT1G49490 59.028 1.69e-170 514