Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1306 ATGCGGCGTCCTTGTTTTCACAAGCTTGTTCTTCCATCCACCATCCAAGCCGGTCAACTGAGGGTTCCAGATCATTTTTTGAGGAATTTTGGGGAGGAGCTCTCTACAATTGCTACCCTAAGTGTTCCTGATGGCAGTGTCTGGCGTATTTGTTTAAAAAGGGTAGACAACAAATTTTGGCTCCATGATGGTTGGAAGGACTTCGTTCAACGTTACTCCATTGGTGTTGGATGCTTTTTGGTGTTCAGATATGAAGGGAATTCATCTTTCAATGTTCATATTTTCAATTTGGCTGCTTCTGAGATAAACTATCAATTAGCAAATCGAAGTAATGATGAACGGCCTTACTTTACCAACCAACATATTTTTGATGAAATGGAAGATGAAGATTCTATTGAATTCTCGGATTCAACACCTTCACATTTAACCCCTGGTGCATTTCATAACATGGTTATTGCGGGATCTGTGGATCAATTGACACCTGGCAAGAATTATACTCCTTCACTGTTGCAGAATTTGTTTAATGGGTCTAAACTTAATAGCATAAACTGGGGAGATACCGTTTCTTCAAAGGGTGCCAATTCACAAAACAATCAATTGACCAAAGATAAAGGTGCTCAGTTCAATGCAGCTGAATTTAAAAGGTCTACTGAAGAGTTGAAATTGCATGTGTCCAATAATGAAATGCAGAGAGTTAAAAGAACTGTAAGAAAAAGGCGGAAAACTGATCCTAGTGGTGAAGAATCCTCTCCTCATAATGAAGAGGATGTAGAAATGCGTTTTAGATTTTATGAAAGTGCTTCTGCAAGAAAAAGAACCGTGACAGCAGAAGAAAGAGAAAGGGCAGTTAATGCTGCAAAAGCATATGAACCGCCTAATCCCTTCTGTAGGGTTGTCCTGCGGCCCTCCTATCTGTATAGGGGATGCATAATGTATTTGCCTTCTTGCTTTGCAGAAAAGCATCTGAATGGGGTTTCAGGTTTCATCAAACTCCAGATTACTGAGGGGAGACAGTGGCCAGTTCGCTGCCTTTATAGAGGCGGTAGAGCCAAGTTAAGCCAAGGGTGGTTCGAATTCGCCCAGGATAACAACCTCAGGGAAGGCGATGTCTGTGTTTACGAGCTGATTAGAGCGACGGAAGTAGTGCTGAAAGTTACTATATTCCAAGTCCTTGAAGAAGATGTGGGATTGTTGAACCCTCCCATGCAGCAAAACCCAAGCATGAGTCCAACCTCAAAACTGTTGAACAATCCCTTGCAACAGCGAGATGTGAGCCCCATTAAGATGATCAGAAATTAG 1299 0.418 MRRPCFHKLVLPSTIQAGQLRVPDHFLRNFGEELSTIATLSVPDGSVWRICLKRVDNKFWLHDGWKDFVQRYSIGVGCFLVFRYEGNSSFNVHIFNLAASEINYQLANRSNDERPYFTNQHIFDEMEDEDSIEFSDSTPSHLTPGAFHNMVIAGSVDQLTPGKNYTPSLLQNLFNGSKLNSINWGDTVSSKGANSQNNQLTKDKGAQFNAAEFKRSTEELKLHVSNNEMQRVKRTVRKRRKTDPSGEESSPHNEEDVEMRFRFYESASARKRTVTAEERERAVNAAKAYEPPNPFCRVVLRPSYLYRGCIMYLPSCFAEKHLNGVSGFIKLQITEGRQWPVRCLYRGGRAKLSQGWFEFAQDNNLREGDVCVYELIRATEVVLKVTIFQVLEEDVGLLNPPMQQNPSMSPTSKLLNNPLQQRDVSPIKMIRN 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1306 432 CDD B3_DNA 294 388 IPR003340 GO:0003677
Lele46g1306 432 Pfam B3 DNA binding domain 8 96 IPR003340 GO:0003677
Lele46g1306 432 Pfam B3 DNA binding domain 299 389 IPR003340 GO:0003677
Lele46g1306 432 ProSiteProfiles B3 DNA-binding domain profile. 296 391 IPR003340 GO:0003677
Lele46g1306 432 MobiDBLite consensus disorder prediction 230 257 - -
Lele46g1306 432 Gene3D - 273 392 IPR015300 -
Lele46g1306 432 ProSiteProfiles B3 DNA-binding domain profile. 5 98 IPR003340 GO:0003677
Lele46g1306 432 PANTHER B3 DOMAIN-CONTAINING 3 380 - -
Lele46g1306 432 MobiDBLite consensus disorder prediction 240 257 - -
Lele46g1306 432 SUPERFAMILY DNA-binding pseudobarrel domain 3 96 IPR015300 -
Lele46g1306 432 Gene3D - 1 98 IPR015300 -
Lele46g1306 432 SMART B3_2 6 98 IPR003340 GO:0003677
Lele46g1306 432 SMART B3_2 296 391 IPR003340 GO:0003677
Lele46g1306 432 SUPERFAMILY DNA-binding pseudobarrel domain 289 388 IPR015300 -
Lele46g1306 432 CDD B3_DNA 4 96 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1306 Lele-ChrLele46 20246828 20250231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1306 1 396 B3 DNA Binding Superfamily AT3G18990 48.872 1.31e-124 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele46g1306 B3 2.1e-16 CL0405