Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1291 ATGATGATGATGATTCCACCGTCGTCTTATTCTTCTTCTTCAGCTCCTTCTCAGCCACCTTATCTTCGTTTTCATCGTTGGGCCCCATCTTCTTCTCCAGTACCGGCACCGGCACCGGCCCTGACTCTCCTTCCGGTACCTGTAAGCGAGACATCGCCTCTGCCATCAAAGTTGTCGATTGACTTCAGTCCACCACTGATTGCAATGGTGGTCGTCGTTGCCGCTGCCTTCCTTCTTGTTACCTATTCCCGCCTAATCTCCCGCCACCTCATGCCTCCTATAACCCGCCTCGCTCGCCGGTGGCGTCGCCGTAGGCGACGTTCCTACCTCCCCTCCTCCGCCGGCGACCTCGAGTCGCTTACTTATGATTCTCCTTTTGAGCCAATTGATGGCCCTCACATGTTCTCCCCTTATGGTCTCGACGAGTCCATCATCAAGACCATACCGTTTTCCCTCTACACCGCCAAATCAAAGAATCAATTCGAAGAGTCTCGTCGCGATTGCGCGGTTTGTTTGTTGGAGTTCGAAGACGATGAGTACGTGCGAACGCTGCCGTTTTGTTCTCACACTTTTCATTTGGATTGCATCGACGTTTGGCTCAGGTCGCACGCAAATTGCCCTCTCTGCCGCGCCGGAGTTTTGTGCGCGGAGTCCCCGTTCACGCCAATGATGGCGGCGAGGATTCGGCCGAGCCTCGACGACGACTCGATTATGCATAGAATCAGTATGGACCCTCTGGTCGAAGCTCCATGGCCAGTGGCTCATTCTCTGGTTTCGGAGATCGCTCCTTGCAACGAAGAGCAATCGCCAAGAACGAACCACGCGAATCCGGAGGAAGATCGATTCAACCGCGGTCGTGATTTCCTCCTGAAGCGATCCTACTCGTTCGGATTCGAACGGAGCTTAGCATCGGAGAGAATGGTGATGGAACCGGCGACGGCGTCACCGTGGCGGTACCACCGAAGGGGAAGCAGCAGCAGCTTCTGGAGCAAAAGGCCTTCACCGTTCGGATCATTGGGAAAGTCCAGGGTGTTCTCGTTCAGATACTACAGAGGGATGAAGTCTCCGTTCTTCCGGAGACGAGGGCTCTTCCCCCAGTCGGAATCAAGCATGAGGTCATACAACTTAGGAGGAGGAGGGAGCTCGTCTCGTCGAAGCAAGTCAATAGCAAGCCCGATGTTCCTGAGGTCGTCGGCAGCGTTAGCTGCGGTGGGAGCAGCTGCTTTCTCTTCAAGCCGGCTAAGGTGCGGCGACCCGGAGGCATTGCTGTCACCGGAGAGATACAACAGGAGATAA 1296 0.5517 MMMMIPPSSYSSSSAPSQPPYLRFHRWAPSSSPVPAPAPALTLLPVPVSETSPLPSKLSIDFSPPLIAMVVVVAAAFLLVTYSRLISRHLMPPITRLARRWRRRRRRSYLPSSAGDLESLTYDSPFEPIDGPHMFSPYGLDESIIKTIPFSLYTAKSKNQFEESRRDCAVCLLEFEDDEYVRTLPFCSHTFHLDCIDVWLRSHANCPLCRAGVLCAESPFTPMMAARIRPSLDDDSIMHRISMDPLVEAPWPVAHSLVSEIAPCNEEQSPRTNHANPEEDRFNRGRDFLLKRSYSFGFERSLASERMVMEPATASPWRYHRRGSSSSFWSKRPSPFGSLGKSRVFSFRYYRGMKSPFFRRRGLFPQSESSMRSYNLGGGGSSSRRSKSIASPMFLRSSAALAAVGAAAFSSSRLRCGDPEALLSPERYNRR 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1291 431 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 132 214 IPR013083 -
Lele46g1291 431 PANTHER RING-H2 FINGER PROTEIN ATL16 49 240 IPR044600 GO:0016567|GO:0016740
Lele46g1291 431 SMART ring_2 168 209 IPR001841 -
Lele46g1291 431 FunFam RING-H2 finger protein ATL65 133 214 - -
Lele46g1291 431 CDD RING-H2_PA-TM-RING 167 210 - -
Lele46g1291 431 Pfam Ring finger domain 167 210 IPR001841 -
Lele46g1291 431 ProSiteProfiles Zinc finger RING-type profile. 168 210 IPR001841 -
Lele46g1291 431 SUPERFAMILY RING/U-box 156 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1291 Lele-ChrLele46 20150756 20152051 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1291 60 431 C3H Transcription Factor Family AT3G18930 52.239 6.31e-98 297