Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1273 ATGTCTTCCTCTGAGAGATCCAAGCTCACCGGAACTCCGATTACCTCCATCTCCATTCAGCCACCGCCTAACTTCTTCTACAACGACCACGAACACTCTGTCATCGTGGAGGCACTCGCCAATGTCGTCGTCGGTTCCACCAGCAGCACTATTGCAGCCATCACCTCCAGGGATCTCATCCAAGAAATTCGGTTTCCTCCTACCTTTGAGTACTCCGAGTCAGTATCTACCGCCACCTCGGCCCCAATCGGAATTGTTCCGGCTATGGGCGTCGAAGCTTGCGGAGAATGCAAAATCGAAGGGTGCTTAGGTTGCAAATTTTTTCTAGAGGAGAAAAAGAAAACTGGAGGTAGAAGGAAGACGGCGACGACTTCGTCGAAGAAGAAGAAGTACAGAGGAGTGCGACAGAGGCCGTGGGGAAAATGGGCTGCCGAGATCCGAGACCCGAGAAGGGCTACCCGGGTTTGGTTGGGGACGTTCAATACCGCAGAGGAAGCCGCATGCGCATACGATAACGCAGCAATTGAATTTCGCGGGCCGAGAGCGAAGCTCAATTTTCTGTTTCCCGATACCTCGCTGAGTGATTCGCATTCCCAAACAGAGCAAGAGCATATGGAAGTTGAATGCTCAGAATCGGTATTGGAGCAAGCAGAGGAGGGAAATAGAAACTCAAACCCAGGGAATCACTATGACGATGTTTGGACGATGGGAATTGGGAATAGTAAGGAAAATGAATTCTTGGATGGACCTGGAGATCTAGAATTTCAGCAGTGGATGACGATGATGATGGATTTTGGAGGAGATTCCTGA 810 0.5025 MSSSERSKLTGTPITSISIQPPPNFFYNDHEHSVIVEALANVVVGSTSSTIAAITSRDLIQEIRFPPTFEYSESVSTATSAPIGIVPAMGVEACGECKIEGCLGCKFFLEEKKKTGGRRKTATTSSKKKKYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTAEEAACAYDNAAIEFRGPRAKLNFLFPDTSLSDSHSQTEQEHMEVECSESVLEQAEEGNRNSNPGNHYDDVWTMGIGNSKENEFLDGPGDLEFQQWMTMMMDFGGDS 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1273 269 PANTHER DNA-BINDING DOMAIN 114 217 IPR044808 GO:0003700|GO:0009873
Lele46g1273 269 FunFam Ethylene-responsive transcription factor 2 129 188 - -
Lele46g1273 269 PRINTS Ethylene responsive element binding protein signature 131 142 IPR001471 GO:0003700|GO:0006355
Lele46g1273 269 PRINTS Ethylene responsive element binding protein signature 153 169 IPR001471 GO:0003700|GO:0006355
Lele46g1273 269 SMART rav1_2 130 193 IPR001471 GO:0003700|GO:0006355
Lele46g1273 269 CDD AP2 129 186 IPR001471 GO:0003700|GO:0006355
Lele46g1273 269 Pfam AP2 domain 130 179 IPR001471 GO:0003700|GO:0006355
Lele46g1273 269 SUPERFAMILY DNA-binding domain 130 187 IPR016177 GO:0003677
Lele46g1273 269 Gene3D AP2/ERF domain 129 188 IPR036955 GO:0003700|GO:0006355
Lele46g1273 269 ProSiteProfiles AP2/ERF domain profile. 130 187 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1273 Lele-ChrLele46 20070363 20071172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1273 29 196 AP2-EREBP Transcription Factor Family AT4G34410 44.615 2.58e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele46g1273 AP2 1.1e-14 CL0081