Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1258 ATGTCTGCAGATTCAGATAATTCTGATAAACACATCATGGAGAAGCTTCCCATAAACCCACCTGATGATGAAAAGCATTCTGGTTCTAATGATGAGATGGATACTGCTGCGAGGCAGAGGCGTAAGAGAATCAAAACTTTGTTTATTAACCTTAATGCTATGCTCCCTCATGTCCCCAAGCAGGCAGACAAAGTAACAGTAGTAGATGAAACATTGAACTACATAAGAGTGTTGGAGCAAACTTTGAAAGACCTGGAAAAGAAGAAGCAGGAACGACTCCTTCAATCGTCTGTCTCCAATAATGTTGGAACTGCAAGAGAGGCCTTCATAGCTGAACAAGTAGGTTCGTGTCCATCAAGTCCACAGAATTATAATAAGCCAGTAGGGTTTCGAACTTGGACTTCTGTAAATGTGGTAGTCAACATTTGTGGCCAAGATGCTCAATTCACTGTGTGCTCTTCCAAGAATTGCATCACCACCATCTGCTGTGTTCTCGACAAGTATAACATTCAGGTTTTGTCGGCCCACATTTCATCTCACAATGATCGCAGGTTCTATACGTTTCAAGCACATCTTCTTCCAAGGGCATCATCAGCAGAAGAAACATTCAAGAAAGCTGCTCAAGAAATTATTCAGTGTATCTATTATTGA 651 0.4117 MSADSDNSDKHIMEKLPINPPDDEKHSGSNDEMDTAARQRRKRIKTLFINLNAMLPHVPKQADKVTVVDETLNYIRVLEQTLKDLEKKKQERLLQSSVSNNVGTAREAFIAEQVGSCPSSPQNYNKPVGFRTWTSVNVVVNICGQDAQFTVCSSKNCITTICCVLDKYNIQVLSAHISSHNDRRFYTFQAHLLPRASSAEETFKKAAQEIIQCIYY 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1258 216 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 28 78 IPR011598 GO:0046983
Lele46g1258 216 Pfam Helix-loop-helix DNA-binding domain 38 78 IPR011598 GO:0046983
Lele46g1258 216 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 36 90 IPR036638 GO:0046983
Lele46g1258 216 MobiDBLite consensus disorder prediction 1 37 - -
Lele46g1258 216 CDD ACT_UUR-ACR-like 139 214 - -
Lele46g1258 216 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 37 211 IPR044278 GO:0003700|GO:0006355|GO:0009960
Lele46g1258 216 Gene3D - 34 101 IPR036638 GO:0046983
Lele46g1258 216 SMART finulus 34 84 IPR011598 GO:0046983
Lele46g1258 216 Coils Coil 68 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1258 Lele-ChrLele46 19974961 19976255 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1258 21 216 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 33.333 1.18e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele46g1258 HLH 5.6e-05 No_clan