Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1256 ATGAACTTGCTGCCGCTTATGAAGGACTGGATTTTCCCATGTGTTGGATGGAAAAGGAAAGGAAAATTAAAAAAAAAAAAACAAAGCATGATACATTGGCTGCCTCTATTGGACGTGCTTGTGATCGACCTGTCTGCTTTAATTCAAGCAATGCCTGTCTTGAATAATTCTGATTCCGGTAAACACATGGAGAACCCTTCAAACACAAGAGGGAAGGAGAAGCTTGTTGCTAATAATAGTGATGAGATGGATACTGCTGAGAGGGAGAGGCGTAAGAAAATCAAATCATTGTTTGGTAACCTTCATGCTATGCTCCCTCATGTCCCCAAACAGGCAGACAAAGTGACAGTGGTGGATGAAACATTGAACTACATAAGAGAGTTGGAGCAAACTTTGAAAGACCTTCAAAAGAAGAAGCAGCAACGACTTCATCAATCGTCTGTCGTCTCTAATGTTGGAACTTCAAGAGAGGCCTTCATAGCTGAACATGTAGCTTCGTCCTCATCATTCTCTCCAATTGCTTCAAGTCCACATGAATATGGCCCTGCAGGGTTCCGAACTTGGACTTCTCCGAATGTTGTAATCAACATTTGTGGACAAGAAGCTCATTTCAGTGTTTGTTCTACCAACGATTGCTCCGGCGGCCTCTTCACCGACATCTGTTGTGTTCTCGAGAAGTATACGATTGAGGTTCTGTCTGCCCACATTTCATGTGACAATAATGATCGCAGGTTCTATATGTTTCATGCACAAGTAAACGGAGATTCTGATCAGCTTCCAGGGGCGTTATCGGCTGAGGAAATATTCAAGCAAGCTGGTGAAGAAATTATTCTGTGTCTCTGA 843 0.427 MNLLPLMKDWIFPCVGWKRKGKLKKKKQSMIHWLPLLDVLVIDLSALIQAMPVLNNSDSGKHMENPSNTRGKEKLVANNSDEMDTAERERRKKIKSLFGNLHAMLPHVPKQADKVTVVDETLNYIRELEQTLKDLQKKKQQRLHQSSVVSNVGTSREAFIAEHVASSSSFSPIASSPHEYGPAGFRTWTSPNVVINICGQEAHFSVCSTNDCSGGLFTDICCVLEKYTIEVLSAHISCDNNDRRFYMFHAQVNGDSDQLPGALSAEEIFKQAGEEIILCL 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1256 280 Coils Coil 118 145 - -
Lele46g1256 280 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 78 128 IPR011598 GO:0046983
Lele46g1256 280 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 63 279 IPR044278 GO:0003700|GO:0006355|GO:0009960
Lele46g1256 280 Gene3D - 77 153 IPR036638 GO:0046983
Lele46g1256 280 Pfam Helix-loop-helix DNA-binding domain 86 129 IPR011598 GO:0046983
Lele46g1256 280 SMART finulus 84 134 IPR011598 GO:0046983
Lele46g1256 280 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 86 146 IPR036638 GO:0046983
Lele46g1256 280 CDD bHLH_AtbHLH_like 86 136 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1256 Lele-ChrLele46 19965359 19970280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1256 86 278 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 36.681 1.15e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele46g1256 HLH 5.5e-07 No_clan