Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1252 ATGATTAAGTTAAATAGAACAGCGAAGGGAATTAGGGTTTTCGGCGACACAACAATGGAGCAAGTACCGAATCAAGCTCTCCAACAAGTTCAGTGCTTCGGCCGCAAGAAGACTGCCGTGGCCGTCACCTACTGCAAGCGTGGCCGTGGGCTCATCAAGATCAATGGCTGCCCAATTGAGTTGGTGCAGCCGGAGATCCTCCGTTTCAAGGCATTCGAGCCGATCCTTCTCTTGGGAAAACACCGATTTGCCGGCGTCGACATGAGAATCCGTGTCAAAGGAGGTGGTCACACTTCTCAGATATACGCAATCAGACAGAGTATTGCCAAAGCCCTTGTCGCGTTTTACCAAAAGTATGTTGACGAGCAGAGCAAGAAGGAGATCAAAGACATCCTCGTTAGGTACGACAGGACTTTGCTGGTTGCTGATCCCAGGCGTTGCGAGCCTAAGAAGTTCGGTGGTCGTGGTGCTCGTGCAAGGTTCCAGAAGTCCTACCGTTAA 501 0.509 MIKLNRTAKGIRVFGDTTMEQVPNQALQQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVQPEILRFKAFEPILLLGKHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1252 166 SUPERFAMILY Ribosomal protein S5 domain 2-like 29 166 IPR020568 -
Lele46g1252 166 ProSitePatterns Ribosomal protein S9 signature. 94 112 IPR020574 GO:0003735|GO:0005840|GO:0006412
Lele46g1252 166 PANTHER RIBOSOMAL PROTEIN S9 19 163 IPR000754 GO:0003735|GO:0005840|GO:0006412
Lele46g1252 166 Gene3D - 20 166 IPR014721 -
Lele46g1252 166 FunFam 40S ribosomal protein S16 22 166 - -
Lele46g1252 166 Pfam Ribosomal protein S9/S16 34 166 IPR000754 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1252 Lele-ChrLele46 19942474 19943739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1252 26 166 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 90.071 1.77e-93 266