Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1241 ATGGAAACTCACATACACTCGCCTTATTACACAATGATCATCTTCTTCGTCATGATAATTATTCTTTCATCCTTCCTCACCGTAAACCCTGAAATCGTCCATGAATCTCCATCATCATCGTTATCTCCATTAGTCCCTGAAATCTTAAACTTCATAGACCAAAGAATAGCCTTGGTCTTCCCAATCGTCCAAACCTTCAAGAACACAATAACCTCCGATCCATTTGGTGTCACCAAGACCTGGGTTGGTCCCAACATTTGCAACTACACTGGCTTCTACTGTGACCACCCTCCCGACAACCTCACCGCCTTCACCGTCGCCTCCATTGACTTCAACGGCTTCCAGCTGGCGGCCCCGAGCCTCGAGGGCTTCATCGATAAGCTGCCGGACTTGGCTCTGTTCCATGCCAACTCTAACAACTTCTCCGGGACAATACCGCCCACAATATCCAAGTTGACGTCTCTATATGAGCTTGACTTGAGTAATAACTTGCTTTCTGGGATGTTTCCTATGGCGGTTCTTGGATTGCTCGACCTGTCTTTCTTGGATATTCGGTTCAACTTCTTCTCCGGCGAGGTTCCTCCGGAGATTTTCATGAAGAGCCTGGACGTGTTTTTCCTCAACGACAATAATTTCATGCAGAGGCTTCCCGGTGACTTGGGAGACACGAAGGTGCTGTATCTCACTTTAGCTAACAACAAATTCACCGGACCCATTCCACGGAGCATCGGAAGAGCCTCGGAAACATTGTTGGAGATCTTATTCCTCAATAACCAGTTAATAGGTTGTCTTCCTTACGAAATAGGGTTCTTAACAAAGGTGAGACTCCTGGACGCCGGCAACAACCAGTTGACGGGACCGTTGCCATGCTCGCTGGGGTGCTTGGAGGCGGTGGAGCAACTGAACCTGGACGGAAACTTGCTGTACGGACAGATCCCGGAGGTGGTGTGTGCGTTGGGGAATCTGGTGAACCTATCCTTATCTGATAATTACTTCATTGGAGTAGGACCATTGTGCAGAAAGCTGATAAAAAGAGGAGTACTTGACGTGAGGAAGAACTGTATTTACAGATATGGAGTTTCCGATCAGAGACCCATACAAGAGTGCTTTCGATTCTACATGCACCCGAGGTCTTGTTCCAATCCGGCGTCGTTTAATTTGATACCTTGTAGGGTTTCTTCCCCATGGAGGCATACTAGGGTTGGTTCTTCTACGCCTAACAGACATTTACTGTCTTACTCGGCTCTATCCAGAACCAGAAATGTGAAGAGGATACAAATGTAA 1284 0.4727 METHIHSPYYTMIIFFVMIIILSSFLTVNPEIVHESPSSSLSPLVPEILNFIDQRIALVFPIVQTFKNTITSDPFGVTKTWVGPNICNYTGFYCDHPPDNLTAFTVASIDFNGFQLAAPSLEGFIDKLPDLALFHANSNNFSGTIPPTISKLTSLYELDLSNNLLSGMFPMAVLGLLDLSFLDIRFNFFSGEVPPEIFMKSLDVFFLNDNNFMQRLPGDLGDTKVLYLTLANNKFTGPIPRSIGRASETLLEILFLNNQLIGCLPYEIGFLTKVRLLDAGNNQLTGPLPCSLGCLEAVEQLNLDGNLLYGQIPEVVCALGNLVNLSLSDNYFIGVGPLCRKLIKRGVLDVRKNCIYRYGVSDQRPIQECFRFYMHPRSCSNPASFNLIPCRVSSPWRHTRVGSSTPNRHLLSYSALSRTRNVKRIQM 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1241 427 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 22 394 - -
Lele46g1241 427 Gene3D Ribonuclease Inhibitor 61 253 IPR032675 -
Lele46g1241 427 Gene3D Ribonuclease Inhibitor 254 381 IPR032675 -
Lele46g1241 427 SUPERFAMILY L domain-like 67 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1241 Lele-ChrLele46 19881304 19882587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1241 26 376 Leucine-rich Repeat extension Gene Families AT3G24480 42.735 1.24e-81 258