Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1237 ATGGACATCTCCTCTTTCTGTATCGTCTCACTCTTGTTATCTTCTTCCTTGCTCCATTCATCACTTTCAGATTCTTCTGCAGAACTCCCTCGCTCTGAAAGAGAAGCTTTAGAGATCATCATCGGCGGCGGCGGCGGAGGAGGAGGAGGCGCCCCAGCTCCTTCCCCTTATGACGACTCTCCTCCCGCCGACTGTCCCCCTCCGCTTACTCCACCGCTGTCCCCCTTCCTAGAGAAAGCACGCAGGGTGCTCCTGAAATTCAAAGCCACAATATACGACCCCAATTGCTTTACCAGCAACTGGAAGGAAGGTGTCAGCCCATGTCTATACAAAGGAGTTAAATGTGCAACTTACCCAAATCCAAAGAAGCAAGCCGTCTCTGGATTAGATTTCAACCAAGCTGGTTTCTCCGGTCGTCAAGGTTCAAACTTGCGTCTCGCCGGAATCCTTGACTCGATTCCAGAAATAACATTCTTCCATGTCAACTCCAACAATTTCTCAGGACAAGTCCCCACAAAAATCGTTAAATTCAATTATTTCTACGAGCTCGACTTAAGCAACAACAAGCTCGAAGGTTGTTTCCCAATGGAAGCTCTTTCAAATAAGAAACTATTTTTCTTAGATCTCAGGTTCAATAACCTCATCGGACCAGTCCCGCCGAAGCTTTTCAACATGGATCTCGACGTCATCTTCATCAACAACAACAAATTCAGCAGCAACCTTCCACGGAATTTCGGTAACACACCTGCGAGATACCTCACATTCGCCAACAACAAGTTCACCGGACCAATCCCAAGCAGCATAGGAAATGCGTCAAAGTCGTTGACCGAAGTTCTGTTCTTAGGAAACCAGTTTTCTGGGTGTTTGCCTTACGAGATTGGGTTCCTGAAGAACGCGGTAGTCTTCGATGTGAGCAATAACTCATTGACGGGACCAATCCCAGAATCTTTCGCTTGCTTGCAGAAGATTCAGTTCTTGAATCTAGCTAACAACAAATTCTACGGCGCTGTTCCAGAATCAGTGTGCGAGCTTCCTGGGATATGCAACAAGGGGAATCTGACGTTGGCGGATAATTATTTCACTCACGTAGGACCAGAATGCAAGAAGCTGATAGATTCGAAGGTGCTTGACGTGAGGCAGAATTGCATAGAAGGGCTTCCCAATCAGAAATCGCCAGAAGAATGTCACAAGTTCCTATCTTGTGTGAAGCAATGTCCGAATGAAGGCTCTCTCAAGCTTGTTCCGTGTAAGAAAGGCTATTATTCAAAGTACGATGAAACGGCGCCTGCTCCTGCGCCTGTGACGTACGAGTCTCTGACTCCAACACGACATCGTTTAATGTGA 1344 0.4695 MDISSFCIVSLLLSSSLLHSSLSDSSAELPRSEREALEIIIGGGGGGGGGAPAPSPYDDSPPADCPPPLTPPLSPFLEKARRVLLKFKATIYDPNCFTSNWKEGVSPCLYKGVKCATYPNPKKQAVSGLDFNQAGFSGRQGSNLRLAGILDSIPEITFFHVNSNNFSGQVPTKIVKFNYFYELDLSNNKLEGCFPMEALSNKKLFFLDLRFNNLIGPVPPKLFNMDLDVIFINNNKFSSNLPRNFGNTPARYLTFANNKFTGPIPSSIGNASKSLTEVLFLGNQFSGCLPYEIGFLKNAVVFDVSNNSLTGPIPESFACLQKIQFLNLANNKFYGAVPESVCELPGICNKGNLTLADNYFTHVGPECKKLIDSKVLDVRQNCIEGLPNQKSPEECHKFLSCVKQCPNEGSLKLVPCKKGYYSKYDETAPAPAPVTYESLTPTRHRLM 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1237 447 Pfam Leucine rich repeat N-terminal domain 80 115 IPR013210 -
Lele46g1237 447 Gene3D Ribonuclease Inhibitor 251 413 IPR032675 -
Lele46g1237 447 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 13 433 - -
Lele46g1237 447 MobiDBLite consensus disorder prediction 55 71 - -
Lele46g1237 447 FunFam Leucine-rich repeat receptor protein kinase EMS1 241 340 - -
Lele46g1237 447 Gene3D Ribonuclease Inhibitor 77 250 IPR032675 -
Lele46g1237 447 MobiDBLite consensus disorder prediction 41 71 - -
Lele46g1237 447 SUPERFAMILY L domain-like 78 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1237 Lele-ChrLele46 19863863 19865206 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1237 74 400 Leucine-rich Repeat extension Gene Families AT4G13340 43.465 1.90e-75 249