Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1235 ATGGATTCAGTGACTGCTGATACAGCTAATTTACCTCCTACTAAAGATCCATCTACTTCACCTTCTGTTAAAGATCGTGAAGGACAAACTGCTCCCCCTGCAGTCTCTGGGCAAGAAAATTCTTCTCATGTGACATCACCTACGCAATCTTCCACTGGCATTTCATCATGGGCTAGAAATTTGAAAATTCCCCAGCCATTTTCTGGTTCTCATGATGATCCAGCAAGTGAAAATGCTGGGAAATCTACTTTTGCCCGCTTCACTAATAGTTTAACAATGCGGTTGTCTCCAAAACCATCTTCATCAGATGACAACTCCAATGAAGCTGCTGCTCAATCTAATTTGATTGAAAGTTTTGCAAAGGGTCTGGTTGACTCTTCTAGAAATGCTGTGAAAGCTGTGCAGGTCAAGGCCCGACATGTTGTTTCTCAGAATAAACGTCGATACAAGGAGGGAGGATTTGATCTAGATATGACATATATCACGGAAAACATTATAGCTATGGGATTTCCTGCTGGTGACATGAGCTCTGGGTTCTTTGGTTATGTAGAAGGGCTTTACAGAAATCATATGGAAGAAGTGATTGAGTTTTTTGAGACCCATCATAAGGGTAAATACAAAGTATACAATCTTTGTTCTGAGCGGCTGTATGATGCATCATTATTTGAGGGGAAGGTGGCCAGTTTCCCATTTGATGACCATAATTGCCCACCAATGCAACTGATTATATCATTTTGTCGAAGTGCTTACGCATGGTTGAAGCAAGACATTGAGAATGTTGTGGTTGTCCACTGTAAAGCTGGAATGGCAAGGACAGGGTTGATGATTTCTAGTCTTCTATTATTCTTGAAGTTCTTCCCAACTGCTGAGGAGTCCATTGACTACTACAACCAGAAAAGGTGTTTCGATGGAAAAGGACTTGTTCTGCCAAGTCAGATTAGATATGTCAAATATTTTGAACGTGTCTTGACTTACTTCAATGGCGAAAATCCTCCGGTCCGCAGGTGCATGCTTAGGGGATTCCGACTTCACAGGTGCCCTTACTGGATCAGGCCTTCTATAACTGTATCAGATCATAGTGGTGTCTTGTTCTCAACTAAAAAGCATCCAAGAACCAAGGATCTTAATCCAGAAGATTTTTGGTTCAGTGCACCAAAAAAAGGAGTGATGGTCTTCGCATTGCCTGGGGATCCTGGTCTTACAGAGGTAGCCGGGGACTTCAAAATTCATTTTCATGATCGTCAAGGAGATTTTTACTGTTGGTTGAACACAACTATGACCGAAAACAGGAAAATATTGAACACCAGTGATCTTGATGGTTTTGACAAGAGAAAATTACCTTCACCTGGATTCCTGGTTGAGGTTGTGCTTGTGGATTATAATGGCAATGTCACGACATCCAAACCTGAAACTGTACCCAATAGTTCAGATGATAGGTCAAGTAGTATTCCTACCCCAGTTGATGCAAGCACCACAGCTCCAAAAGCTGAAAAAGGGTCAGAGAATCGCGATAAAGAGGATGACGTGTTTTCAGACGGGGAGTCAGAGGATTCTACTTCAAGAAGCAGGCAAGCAAAAGCAGCTTCTGTAGCAGCTACTAATCCTAATTCTACCGCTGGATCTGAGCCTAAAACTTCAAGTGAGATGACAAGCTTAACGCATGTCACAGAACAAATTTCTTTAGGATCTGCTACTCCGATTCCTATGGGTAGCAAGCTAAAAAGTGAAGATGCAAGAACAGGGTCCAGTGTGGAAGCTCCCAGTTCAGAAAGTGAATTTAAGGCAATGGCTGCAGATGCTTCTGTGTTTACGTTTGGGGATGATGAAGACTATGAAAGTGAGTGA 1845 0.4222 MDSVTADTANLPPTKDPSTSPSVKDREGQTAPPAVSGQENSSHVTSPTQSSTGISSWARNLKIPQPFSGSHDDPASENAGKSTFARFTNSLTMRLSPKPSSSDDNSNEAAAQSNLIESFAKGLVDSSRNAVKAVQVKARHVVSQNKRRYKEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGLYRNHMEEVIEFFETHHKGKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPMQLIISFCRSAYAWLKQDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESIDYYNQKRCFDGKGLVLPSQIRYVKYFERVLTYFNGENPPVRRCMLRGFRLHRCPYWIRPSITVSDHSGVLFSTKKHPRTKDLNPEDFWFSAPKKGVMVFALPGDPGLTEVAGDFKIHFHDRQGDFYCWLNTTMTENRKILNTSDLDGFDKRKLPSPGFLVEVVLVDYNGNVTTSKPETVPNSSDDRSSSIPTPVDASTTAPKAEKGSENRDKEDDVFSDGESEDSTSRSRQAKAASVAATNPNSTAGSEPKTSSEMTSLTHVTEQISLGSATPIPMGSKLKSEDARTGSSVEAPSSESEFKAMAADASVFTFGDDEDYESE 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1235 614 ProSitePatterns Tyrosine specific protein phosphatases active site. 263 273 IPR016130 GO:0016311|GO:0016791
Lele46g1235 614 MobiDBLite consensus disorder prediction 522 565 - -
Lele46g1235 614 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 132 329 - -
Lele46g1235 614 MobiDBLite consensus disorder prediction 464 595 - -
Lele46g1235 614 MobiDBLite consensus disorder prediction 464 489 - -
Lele46g1235 614 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 124 571 - -
Lele46g1235 614 MobiDBLite consensus disorder prediction 497 521 - -
Lele46g1235 614 SMART PTEN_C2_2 331 459 IPR014020 -
Lele46g1235 614 Gene3D Protein tyrosine phosphatase superfamily 132 329 IPR029021 -
Lele46g1235 614 MobiDBLite consensus disorder prediction 90 109 - -
Lele46g1235 614 MobiDBLite consensus disorder prediction 1 80 - -
Lele46g1235 614 ProSiteProfiles Phosphatase tensin-type domain profile. 147 326 IPR029023 -
Lele46g1235 614 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 160 329 IPR029021 -
Lele46g1235 614 CDD PTP_PTEN 157 321 IPR045101 GO:0016791
Lele46g1235 614 ProSiteProfiles C2 tensin-type domain profile. 333 460 IPR014020 -
Lele46g1235 614 MobiDBLite consensus disorder prediction 1 26 - -
Lele46g1235 614 MobiDBLite consensus disorder prediction 33 63 - -
Lele46g1235 614 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 240 300 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1235 Lele-ChrLele46 19852182 19856826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1235 4 614 Protein tyrosine phosphatase (PTP) family AT3G19420 64.952 0.0 823