Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1229 ATGAATCTTTACTCCAAGAACCCCCATTGTTTCTGGTGTAATGCTTCGTTATTTCTTCTTCTTCTTCTTCCTTCCTCTGCTCTGAACACTGATGGGGTTTCTTTGCTTTCTTTCAAATACTCCATCCTCAGCGACCCATTATCAGTATTAGAGAGCTGGGGCTACATCGACGAAAACCCATGTTCATGGAATGGAGTTACCTGCGATGAAATCGAAAGCCCAGGTACTATGTTGAGAGTGATTTCCTTAGTTCTTCCTGACAGCCAGCTTCTGGGTTCGATTTCTGAAGAACTAGGAAACATCCCATACCTTCGACGTCTCGATTTGTCCTCAAATTTCCTCAATGGATCTTTACCCAGTTCCATTTTCAACTCTTCTGAGCTTCAGGTTCTCCACCTAGCCAACAATGTCATCTCCGGCGAGCTCCCTGAGTTGATCGGCCAACTCAAAAATCTTCAAGTTCTTAACCTCTCCGACAATGCTTTTGCTGGGTCAGTCCCAGAAAGTCTCACTGCTTTGAAAACTCTGACCTTTGTTTCTCTGAGAAGCAACTATTTTTCTGGTCAAGTACCTAGCGGGTTCAACTCTGTGCAAGTTCTAGATCTGTCTTCGAATCTGCTTAATGATTCTTTACCAAATAACTTTGGCTGCGAACGATTGAGATACTTGAATCTATCTTACAATAAGATTTCAGGGATCATTCCTCCTAAATTTGCCACTCTGATTCCAGAAAACTCTACCATTGATCTTGCATTCAACAATCTGACCGGAGCAATACCAGAATCTCCGGTGATTCTGAATCAGAAAACAGAGTATTTTGCTGGAAATGGTGATGGTCTTTGTGGGAAGCCTCTGAAAAATCTATGTTCTATTCCTTCTACTCTCTCTATTCCTCCATCCAACACAACAACCACCACCACATCTTCAACACCTGCCATTGCAGCCATACCAAAAACAATCGACACAAACCCAGAAACAAACACAACAACAACAACAAACGGCTCATCGAATGGCTTAAAACCGAACACAATAGTAGCCATTGTCCTCGGAGATTTGGCTGGTATAGTCATCATTGCCATGGCCATTTTCTTCGTCTATCATCAAAGAATCACAAAAGATCATGCCAAAGCTAAAGAAGAAGACCCATGTTTTGTGAGAGTGAAACCTCTAAAGCTTCACTTTTCCTGCTTGAGAACCAAAGAAGACTCGAATTCATCAGAAGCAACCGGGTCTGACAGCGACCATGAGAGTACTAAATTTGACACGACAACCTCGAATCTTCCGAAAGAAACAGCTCTTGTGACACTAGATGCAGAGACAGAGCTGGATTTGGAGACTCTGCTTAAGGCTTCAGCGTTTATGTTGGGAACGACGAGGAGTGAGAGTATAGTGTACAGAGCAGTGCTTGAAGATGGAAGGGCTTTTGCAGTAAGAAGGATTGGAGAATGTGGGTTTGAGAAAAAGAAGGATTTTGAGAATCATATGAAGATTGTTGCCAAGATTCGCCATCCCAATTTGGTTAATGTTCGTGGGTTTTGTTGGGGAGAAGATGAGAAGCTCGTGATCTGTGATTATGTTCCCAATGGCAGCCTTGCTAGTAGCTTCAGCCACAGAAGAGCAGGGTCTTCTTCTCCATTGAACTTGCCGTTGGAATTGAGGTTGAAGATAGCGAAAGGAATCGCACGAGGCTTAGCTTTCATTCACGAGAAGAAACATGTTCATGGCAACATCAAACCCAGCAACATCTTATTAAGCTCAGAAATGGAACCTATAATAAGCGATCTTGGGCTCGACCGTCTGTGGCCTGCCGGTTCAAAGGTGAACTGGGGAAGCCAACCGGACCTCCCTCATATGGGTTCGTCAAGTGGGACCAAACAAATGTTGACATATCAAGCACCAGAGTCTCTTCTTCAAAGCGCTCAAGTCCAACCCAAGGCCAAGTGGGATGTGTACTCGTTTGGGATAGTGCTGTTGGAGCTTCTGAGTGGGAGGGTTTTCTCGGACCGGGAGTTAGACCGGTGGCTCAGAGAGGACGGGTCAGTGGAAGAGGAAAGAAACCGGGTTTTGAGGATGGTTGATGTGGGCATGAAGAGTGAGGTTGAAAGGAAGGAAGAAGCCATATTGGCGTGCTTCAAGTTAGGGTTTCGTTGTGCCTCTCTTAAGCCTCCAAAAAGACCGTCCATGAAAGAGGCTTTACAAATCTTAGAGAAAATACCTAATTAA 2223 0.4431 MNLYSKNPHCFWCNASLFLLLLLPSSALNTDGVSLLSFKYSILSDPLSVLESWGYIDENPCSWNGVTCDEIESPGTMLRVISLVLPDSQLLGSISEELGNIPYLRRLDLSSNFLNGSLPSSIFNSSELQVLHLANNVISGELPELIGQLKNLQVLNLSDNAFAGSVPESLTALKTLTFVSLRSNYFSGQVPSGFNSVQVLDLSSNLLNDSLPNNFGCERLRYLNLSYNKISGIIPPKFATLIPENSTIDLAFNNLTGAIPESPVILNQKTEYFAGNGDGLCGKPLKNLCSIPSTLSIPPSNTTTTTTSSTPAIAAIPKTIDTNPETNTTTTTNGSSNGLKPNTIVAIVLGDLAGIVIIAMAIFFVYHQRITKDHAKAKEEDPCFVRVKPLKLHFSCLRTKEDSNSSEATGSDSDHESTKFDTTTSNLPKETALVTLDAETELDLETLLKASAFMLGTTRSESIVYRAVLEDGRAFAVRRIGECGFEKKKDFENHMKIVAKIRHPNLVNVRGFCWGEDEKLVICDYVPNGSLASSFSHRRAGSSSPLNLPLELRLKIAKGIARGLAFIHEKKHVHGNIKPSNILLSSEMEPIISDLGLDRLWPAGSKVNWGSQPDLPHMGSSSGTKQMLTYQAPESLLQSAQVQPKAKWDVYSFGIVLLELLSGRVFSDRELDRWLREDGSVEEERNRVLRMVDVGMKSEVERKEEAILACFKLGFRCASLKPPKRPSMKEALQILEKIPN 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1229 740 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 79 737 - -
Lele46g1229 740 Pfam Leucine Rich Repeat 219 238 IPR001611 GO:0005515
Lele46g1229 740 Gene3D Ribonuclease Inhibitor 28 195 IPR032675 -
Lele46g1229 740 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Lele46g1229 740 FunFam Leucine-rich repeat receptor-like protein kinase 196 291 - -
Lele46g1229 740 SUPERFAMILY L domain-like 31 285 - -
Lele46g1229 740 Gene3D Ribonuclease Inhibitor 196 291 IPR032675 -
Lele46g1229 740 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 28 195 - -
Lele46g1229 740 Pfam Leucine rich repeat 102 161 IPR001611 GO:0005515
Lele46g1229 740 Gene3D Phosphorylase Kinase; domain 1 417 525 - -
Lele46g1229 740 SUPERFAMILY Protein kinase-like (PK-like) 462 736 IPR011009 -
Lele46g1229 740 ProSiteProfiles Leucine-rich repeat profile. 219 240 IPR001611 GO:0005515
Lele46g1229 740 Pfam Protein kinase domain 462 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g1229 740 Gene3D Transferase(Phosphotransferase) domain 1 526 740 - -
Lele46g1229 740 MobiDBLite consensus disorder prediction 402 419 - -
Lele46g1229 740 MobiDBLite consensus disorder prediction 402 424 - -
Lele46g1229 740 ProSiteProfiles Protein kinase domain profile. 449 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1229 Lele-ChrLele46 19813928 19816340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1229 27 738 Receptor kinase-like Gene Family AT2G15300 50.000 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele46g1229 Pkinase 3.5e-30 CL0016