Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1227 ATGGAGGCGTTGCAGGGAGACGTGGATCGGGTTAAGGGTCCCTGGAGCCCTGAGGAGGACGAGTTGTTGAGGCAGCACGTGCAACGGCACGGCGCTCGAAATTGGTCGACGATAAGCAAGGCAATCCCCGGACGATCTGGAAAGTCGTGCCGGCTCCGGTGGTGCAACCAGCTCTCACCGGATGTAGAGCGTGGTGCCTTCACTCCCGAGGAGGACGAGATCATCGTGAAGGCACACGCCAAGTTCGGCAACAAATGGGCCACCATAGCCAAGCTCCTCAACGGCCGTACGGATAACTCCGTCAAGAACCACTGGAACTCGACGTTGAAGCGCAAGTACTCGTCATTGGTCGGCGACGTCGAAGATCCATCGCTCCAACCCTCTAAGAAGCTGGCCACAGGAGATCGATCGCTGACGATTCCACCGGTATTAGCGAGTCATTGTTACAGCCCGAGCAGCCAAACTGGATCTGATGTAAGCGATTCCGGTCATCAGGTAGTCTCTAGTACTCCGACTCTGATTCGGCCTGAATCAAGACCGCCGGATGCGATCTCGAAGAAGGATCTCTCAACAGAACTCACTCTGTCTCCTCCTGGATTCGTGTCGAAGGAGTTATGGAAGGTTAAAGATTCAGTGGCTATCGCAGAGCATGAGAAGGCATTAACAGCATCGATATTATCATCAACGGAGAAGAAGCAGGGTGGAATCACGACATTTGGTCCAGAGTTACTGGCAGTGATGAAGGAGATGATAAGGGATGAAGTGAGAAATTACATGGCGGCTATGTGA 789 0.5349 MEALQGDVDRVKGPWSPEEDELLRQHVQRHGARNWSTISKAIPGRSGKSCRLRWCNQLSPDVERGAFTPEEDEIIVKAHAKFGNKWATIAKLLNGRTDNSVKNHWNSTLKRKYSSLVGDVEDPSLQPSKKLATGDRSLTIPPVLASHCYSPSSQTGSDVSDSGHQVVSSTPTLIRPESRPPDAISKKDLSTELTLSPPGFVSKELWKVKDSVAIAEHEKALTASILSSTEKKQGGITTFGPELLAVMKEMIRDEVRNYMAAM 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1227 262 FunFam MYB transcription factor 12 63 - -
Lele46g1227 262 FunFam Transcription factor MYB44 66 112 - -
Lele46g1227 262 ProSiteProfiles Myb-like domain profile. 7 58 IPR001005 -
Lele46g1227 262 MobiDBLite consensus disorder prediction 149 190 - -
Lele46g1227 262 MobiDBLite consensus disorder prediction 149 175 - -
Lele46g1227 262 CDD SANT 14 56 IPR001005 -
Lele46g1227 262 Gene3D - 65 132 - -
Lele46g1227 262 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Lele46g1227 262 PANTHER MYB PROTEIN-RELATED 12 165 - -
Lele46g1227 262 SMART sant 63 111 IPR001005 -
Lele46g1227 262 SMART sant 11 60 IPR001005 -
Lele46g1227 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 58 IPR017930 -
Lele46g1227 262 CDD SANT 66 109 IPR001005 -
Lele46g1227 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 113 IPR017930 -
Lele46g1227 262 SUPERFAMILY Homeodomain-like 9 105 IPR009057 -
Lele46g1227 262 Pfam Myb-like DNA-binding domain 15 73 - -
Lele46g1227 262 Gene3D - 11 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1227 Lele-ChrLele46 19801307 19802095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1227 9 262 MYB Transcription Factor Family AT5G67300 48.201 5.93e-72 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele46g1227 Myb_DNA-bind_6 3.5e-19 CL0123