Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1193 ATGCTCGCTTACGACGCGTCAACTATAAAATGCGTCACTTTAGCCCGTCTTCTTCGTTCTTACGCGGCATTGCCCTTTCCCACATTCCTCTGTACGCTTGACTTCTCTCCCTTAAACCTCGTGATTTCTATTCCTCCATTACTAATTTTACCTCTCAAAACTGAATTCATTCTTCAAATGATGATGATGATGATGCGTTCGTTCTATGGCTCGCTGGAACGCTGTTTTGGCGGTCTTGGAGGTGGAAGCGACTGTCTCCTCTGGCACTCGGACTTGAAGCCACACGCCTCCGGTGATTTCTCCATCGCCGTCGCTCAAGCCAATTCCAGCCTCGAAGATCAGAGCCAAGTCTTTACGTCTCCCTCTGCCACCTACGTCGGTGTCTGTGATGGCCATGGCGGTCCTGAAGCTTCTAGATTTGTTAATAAACGCCTCTTTCCTTATTTACAAAAATTTTTGGCTGAAAATGGAGGATTATCAGTGGATGTGATAAAAAAGGCGTTTCATGCAATCGAGGAGGATTTCTTGAGCTTAGTGAAGCAATCGTTGCAAACATGTCCACGGATTGCTTCCGTAGGATCGTGTTGTCTTCTTGGTGCAATTTCTGATAATGTATTATATGTTGCGAACCTTGGTGATTCTAGAGTAGTTCTTGGCCGGAAAGCTTTGGAGAGTCACAAGCATCCGGTGGTAGCACAACGGTTGTCAACTGATCATAATGTATCTATTGAGGAGGTGAGGAGAGAGGTCAAATCTCTTCATCCTGATGATGAACACATTGTGATTTTTAGTCGTGGAACTTGGCGGATTAAAGGCATTATACAGGTGTCAAGATCTATCGGTGATGTGTATCTCAAGAATCCTGACGCTTGTAACCCTATTCATTTGAAACGTCCGGTAATGACGGCCGAACCATCGGTCATTATCAAGGAGCTTGGATCACAAGATTTGTTTCTGATATTTGCATCAGATGGGCTCTGGGAACAATTAACTGATGAAGAAGCAGTTGAGATTGTGTACAAATATCCAAGAGCTGGAATTGCCAAGAGATTGGCATTCAATCAAACAGTTTTGGCTCATGCTCTCGCCGACGCTATTCCCCTGATACTCACTTCCAATATCCATTCCACAACCCACTTTCAAATCACGCTTCTCTTACAATCATCACTCACTTTCTCAGATCATAAGCAAATGAGCGCCAGTAATTTGGTGGCCGAGGCAACCTGGAAGGAGATCGAATCAAAACGTTCAGTGACCGACGATCATCTATGGACATTGCACTTCATATTTGGCAAGAACTTTGAGCGAGCCACCAGAATTGTGGATCAAAGAGGTGTCAAGAAGATTTCTGGGGAGCCCAGCGGAAGATCCATCTTCCAGGTAATGGGAGAATCCAGAAGAAAAGAGGAGTACCTGTGTTTCCCTGAGAACTTCTGCTCCTGTTATTCCTTCTTCTATGACGTTATCAACAGAACAGAACAGCTTTGTTGCAAACATCAATTAGCTGCAAGACTTGCAGCATCATTGGGAGCTTACTTGGAAGTGAAGGTGTCTGATGAGGAACTGGCTACGTTGCTGTCCAAACTATAG 1590 0.4478 MLAYDASTIKCVTLARLLRSYAALPFPTFLCTLDFSPLNLVISIPPLLILPLKTEFILQMMMMMMRSFYGSLERCFGGLGGGSDCLLWHSDLKPHASGDFSIAVAQANSSLEDQSQVFTSPSATYVGVCDGHGGPEASRFVNKRLFPYLQKFLAENGGLSVDVIKKAFHAIEEDFLSLVKQSLQTCPRIASVGSCCLLGAISDNVLYVANLGDSRVVLGRKALESHKHPVVAQRLSTDHNVSIEEVRREVKSLHPDDEHIVIFSRGTWRIKGIIQVSRSIGDVYLKNPDACNPIHLKRPVMTAEPSVIIKELGSQDLFLIFASDGLWEQLTDEEAVEIVYKYPRAGIAKRLAFNQTVLAHALADAIPLILTSNIHSTTHFQITLLLQSSLTFSDHKQMSASNLVAEATWKEIESKRSVTDDHLWTLHFIFGKNFERATRIVDQRGVKKISGEPSGRSIFQVMGESRRKEEYLCFPENFCSCYSFFYDVINRTEQLCCKHQLAARLAASLGAYLEVKVSDEELATLLSKL 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1193 529 ProSiteProfiles Zinc finger SWIM-type profile. 459 508 IPR007527 GO:0008270
Lele46g1193 529 ProSiteProfiles PPM-type phosphatase domain profile. 99 373 IPR001932 -
Lele46g1193 529 Pfam Protein phosphatase 2C 120 344 IPR001932 -
Lele46g1193 529 CDD PP2Cc 104 352 IPR001932 -
Lele46g1193 529 SUPERFAMILY PP2C-like 107 351 IPR036457 -
Lele46g1193 529 Gene3D - 90 422 IPR036457 -
Lele46g1193 529 PANTHER ZINC FINGER SWIM DOMAIN-CONTAINING PROTEIN 7 398 529 - -
Lele46g1193 529 ProSitePatterns PPM-type phosphatase domain signature. 125 133 IPR000222 GO:0043169
Lele46g1193 529 SMART PP2C_4 93 371 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1193 Lele-ChrLele46 19570206 19574323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1193 81 351 PP2C-type Phosphatase Gene Family AT3G51370 52.778 3.94e-101 308