Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1192 ATGACGAGTGCTTCGGAACTATTCTACAATCGGAGGTATCGTTTGGGACGAACCTCTGATTATCTGGGGAACGATTCGTTTCCCGATAGATTCCTTCACCCCGATATCAATAACCGTCGCCATCATCACCATCTACATGATTTCAGTGATGGTGAGACTCTCCGACGGTCCACGCCAACGAGGCGGTTATTTCATCGTTTGTCCTCCACGGAGCGAGAATCAGCTAGACTTGACCTAAGGCATAACCGGTCTCTTTCAAACATGGCCAATTCTGCTGAAAATGTTAGCAGTTTCAGGGGCCCTAGAGTGACTGGCAATGACAGGTTACCCATAGCTGTGGTACATGCAAGGGCAAGACTTCTTCAGAGGTTGAGTGCAGAACCTACCTCTAGAAACAGGCAAAGGGGTAGAGTCTCACTAGATATTGATGACACGAGGCATAACTTCAGGGACGCAGAGAGCAGCGAATCATCAACTACTGGTTTAGCTGAGGTTTCCCCGTTAACTAATTTAACTTTACAAATGGAAAGGTCCCAACTCTCACATGAAGTAAACAAAAAACCACCTGGACTCAACCAAGAGGGCATGGACCGTTTGCATATGGAAATCTTTGGCATCAGGGAGACACAAACGGAAGAATTGGAATCCAGAGTACTGCAGGATTGTGGCATATGCCTAGAAACTTTTCTGGAAGGAGATAATCTGATACACTTGCCATGTGGGCACAGATTCCACTACGTGTGTTTGAATCCATGGGTTAGAAAATGTGGGGATTGCCCGTTCTGTAGAAGAGGCATATTTCTAAACTAG 810 0.4617 MTSASELFYNRRYRLGRTSDYLGNDSFPDRFLHPDINNRRHHHHLHDFSDGETLRRSTPTRRLFHRLSSTERESARLDLRHNRSLSNMANSAENVSSFRGPRVTGNDRLPIAVVHARARLLQRLSAEPTSRNRQRGRVSLDIDDTRHNFRDAESSESSTTGLAEVSPLTNLTLQMERSQLSHEVNKKPPGLNQEGMDRLHMEIFGIRETQTEELESRVLQDCGICLETFLEGDNLIHLPCGHRFHYVCLNPWVRKCGDCPFCRRGIFLN 269
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1192 269 SMART ring_2 222 262 IPR001841 -
Lele46g1192 269 SUPERFAMILY RING/U-box 221 267 - -
Lele46g1192 269 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 176 266 IPR013083 -
Lele46g1192 269 ProSiteProfiles Zinc finger RING-type profile. 222 263 IPR001841 -
Lele46g1192 269 PANTHER SI:CH211-59O9.10 65 266 - -
Lele46g1192 269 CDD RING-H2_PA-TM-RING 221 263 - -
Lele46g1192 269 Pfam Ring finger domain 221 263 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele46g1192 Lele-ChrLele46 19565758 19568051 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1192 1 266 C3H Transcription Factor Family AT1G49850 38.662 5.11e-36 127