Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1128 ATGAAACTAAGCCTGCTGATGAATCAATACGGTTCAACTTTGACACCATCAAAGTCGCTACAAATTCCTTCTCTGATGCAAATACTTGGGCAAGGAGGATTTGAACCTGTTTGTAAGGGCAGGCTCTCCAATGGACAAAATATTGCCGTCAAAAGGTTGTCAGGTGCTTCTGGGCAGGGAGATACTGAGTTTAAGAATGAAGTGCTATTAATGGCTAAGCTTCAACACCGAAATTTAGTTCAACTACTTGGTTTTTGTTTGGAAGAGAAAGAACGAATTGGTTTTTGTTTGGAAGAGAAAGAACGAATCCTTATCTATGAACTTCTTCCTAATAGAATAGAAGCCTTGACTACTTCATATTCGGAGCAAAGTTCTATGTCAGCAAGCTCAAGTGAACAAAATAGTAAAACTGCTGATATATTATCAGTAGACGAGGCCTCAATAACTAAGCTACATCCTCGTGGAAGGGGAGATGTTTCCATTCAAACCTGCCAAAACTGCATCAAATTAGCAACTCAAGAGATCAAAATTAAATGTGCAAATAACCATAGTGCAATCATCTGGTATGATCAGTGCATGCTCAGATACTCTCAAAAGAACTTCTTTGGAGTGGCACAAATTTCGCCAATAGCACTCATGTGGAATCAGAAAAATAGAACTTCAGTCAATCAACCTGATGTCGATGCGCTAGCTCTGATTTACCAACTTATAACAGAAGCCACAAATACATCTATTCTATTCAGAGCAAACGGTTCAGAGGTGGTGACAAATAGTTCTGAGCATCGATATGGACTAGTGCAGTGCACAAGAGACTTAAATAGTAGTTCATGCAGCTTCTGTTTGTCACACTTGGTGGTAGAAGCACAGAAGTTTGTTCAACAGAAGGCTGGTTGGCACATATTTGGTCCAAGTTGCAATATAAGACATGAAAATTACATCTTCTATCAGCAAACTTGGGGACCAGAGATTGCCCCTATATCACCAATGAACCAGACAGCACCAATGAACCAGACAGATGGTGCAGGCTCTGCAGAAGAATTCACGTCGAGCACTGTAGCCACTGTAGTTATGCTTGTACCAATTGCAATGGCTGCAGCTTTTTTGGGTTTTGCAAGCTATGTATGTTTTCACAGGAAAAGAAGACTTAGAGGGGGAGAAACAACTGATGAAATTCTGTTGCAGAAGTTGGAGACTTCAAAGAAGCACCACTCGAAAGAGCAAGGAACCACGAAAGATGAGTACGACAGTGAAGTTCAAAACTTTAGTTTGAAGACCATAAAGGCATGGCGACTCTGGAATGAAGGCAAAGGACTTGAACTTGTGGAGAGTGACTTGGTCAACACTTGCAGTGATAAGGATGAAGCATTGAGATGGATCCATATTGGGCTTCTTTGTGTTCAAGAGAATCCACAAGATAGGCCCACAATGTCATCAGTAGTTCTCATGCTAGCAAGTTCCAGTAATCTTCCTCACCCATTTGCTCCTCCATTTTCAGTCGGCAGATTCTTCGCTGCTGTTATTCAGTCCTCCCCTTCCACAAGTGTTTCCAGTAAGAAAGTTCCATGTGATTGTTGA 1575 0.4127 MKLSLLMNQYGSTLTPSKSLQIPSLMQILGQGGFEPVCKGRLSNGQNIAVKRLSGASGQGDTEFKNEVLLMAKLQHRNLVQLLGFCLEEKERIGFCLEEKERILIYELLPNRIEALTTSYSEQSSMSASSSEQNSKTADILSVDEASITKLHPRGRGDVSIQTCQNCIKLATQEIKIKCANNHSAIIWYDQCMLRYSQKNFFGVAQISPIALMWNQKNRTSVNQPDVDALALIYQLITEATNTSILFRANGSEVVTNSSEHRYGLVQCTRDLNSSSCSFCLSHLVVEAQKFVQQKAGWHIFGPSCNIRHENYIFYQQTWGPEIAPISPMNQTAPMNQTDGAGSAEEFTSSTVATVVMLVPIAMAAAFLGFASYVCFHRKRRLRGGETTDEILLQKLETSKKHHSKEQGTTKDEYDSEVQNFSLKTIKAWRLWNEGKGLELVESDLVNTCSDKDEALRWIHIGLLCVQENPQDRPTMSSVVLMLASSSNLPHPFAPPFSVGRFFAAVIQSSPSTSVSSKKVPCDC 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1128 524 Gene3D Phosphorylase Kinase; domain 1 24 93 - -
Lele46g1128 524 ProSiteProfiles Gnk2-homologous domain profile. 207 314 IPR002902 -
Lele46g1128 524 ProSiteProfiles Gnk2-homologous domain profile. 91 201 IPR002902 -
Lele46g1128 524 SMART tyrkin_6 23 263 IPR020635 GO:0004713|GO:0006468
Lele46g1128 524 Pfam Protein tyrosine and serine/threonine kinase 25 91 IPR001245 GO:0004672|GO:0006468
Lele46g1128 524 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 427 505 - -
Lele46g1128 524 SUPERFAMILY Protein kinase-like (PK-like) 24 111 IPR011009 -
Lele46g1128 524 Gene3D - 107 201 IPR038408 -
Lele46g1128 524 Gene3D - 208 314 IPR038408 -
Lele46g1128 524 Pfam Salt stress response/antifungal 244 312 IPR002902 -
Lele46g1128 524 Pfam Salt stress response/antifungal 156 198 IPR002902 -
Lele46g1128 524 Gene3D Transferase(Phosphotransferase) domain 1 391 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1128 Lele-ChrLele46 19073295 19080057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1128 428 492 Receptor kinase-like Gene Family AT4G05200 40.909 1.37e-08 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele46g1128 Stress-antifung 3.4e-08 No_clan