Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1125 ATGTCTGCAATTTCTTTGGTTCTGCTTTCATTCCTTTCTCATCTTACTATTCTCACTGCCCAGCAGGCTCCAGATTTGAGATATAGCTACTGTTTAGATATAGCTAACTATACAAACACAAGCTCCTACCACAGCAACTTTAACATCCTTGTTTCAGAGCTCACTTCCAACACAGAAAATGACTATGGCTTCTACAATTTGTCCCATGGCCAAACTCCTGATAGGGTTAGCATAATTGGGTTATGCAGAGGAGATGTTAAACCAAACGAATGCCGAAGTTGCCTCAAGAATGCTTCAATTATTCTCCCAAAGTCATGTCAGAATCGGAAGGAAGCATTTGGAGGCTATGACGAATGCTTTCTTCGATACTCGAACCGATCCATACTTGGCGGGGTTATGGAATCAGATGTTGAGAGGTACTTGTGCAACTCGTTTAATGCAACGGAGCAGGACAAGTACAACCAAGCGGTTGGTGAGTTATTAAAAGAACTAAGAGACAAAGCTGCGAAAGGAGATTCACTTCGTAAGTTTGCTGCAGCAAATAAATCTGTTTCAAACTTTCAAACTGTGTTTGGTGCAGCTCAGTGTACACCTGATTTGTCTCAGCAAGATTGTTTTAACTGCTTATTAAGGGCTATCTCAGAAGTTCCAGAATATTGTATCCCAAAGAAAGGTGGTAGGTTTATCAAACCCAGCTGCAATATTAGGTATGAGAACTACCCTTTCTATAATCCGCTTCCTGAGGATTCACCGTCGCCGTCATCGTCACCTCCTTCTCTTCCTCCTCCCAAGTCCATATCAGAAGTTAAGGAATGCCTAAATCAGCATGACGGATATATGGCTCCAGAGTATGCTATGAATGGGCAATTCTCAGTAAAATCAGATGTTTTTAGTTTCGGTGTGCTGATACTTGAGATTGTGAGTGGAAAGAAAAACAACAGCATCTTTGATGAAGAGAATGTACAAAATCTGTTAGGCTTTGCATGGAAAAATTGGAGGGAAGGGACAGCCTCAAATATAATAGATCATGTGATGAACAATGGTTCAAGCAATGAAATAAGGAAATGCATCCACATTGGGTTACTATGTGTTCAAGAAAATGTAGCTCTAAGGCCAACCATGGCTTCAGTTGCATTAATGCTTAGTAGCAACTCTTTAACTCTCCCGATACCGTCACCTCCATTTATGAGTAACGGAAGCTTACCGGAGATGAACTTGCCGGAGTATAATTCATCAGAGGTGACAAGATCAACTGAAGGACGAGGAAGAAACTATGCTGAAGCCTCAATAAATGAAGCCTCCATAACTGAGCTTCATCCTCGCTAA 1326 0.4133 MSAISLVLLSFLSHLTILTAQQAPDLRYSYCLDIANYTNTSSYHSNFNILVSELTSNTENDYGFYNLSHGQTPDRVSIIGLCRGDVKPNECRSCLKNASIILPKSCQNRKEAFGGYDECFLRYSNRSILGGVMESDVERYLCNSFNATEQDKYNQAVGELLKELRDKAAKGDSLRKFAAANKSVSNFQTVFGAAQCTPDLSQQDCFNCLLRAISEVPEYCIPKKGGRFIKPSCNIRYENYPFYNPLPEDSPSPSSSPPSLPPPKSISEVKECLNQHDGYMAPEYAMNGQFSVKSDVFSFGVLILEIVSGKKNNSIFDEENVQNLLGFAWKNWREGTASNIIDHVMNNGSSNEIRKCIHIGLLCVQENVALRPTMASVALMLSSNSLTLPIPSPPFMSNGSLPEMNLPEYNSSEVTRSTEGRGRNYAEASINEASITELHPR 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1125 441 FunFam Cysteine-rich receptor-like protein kinase 10 137 242 - -
Lele46g1125 441 Gene3D - 134 242 IPR038408 -
Lele46g1125 441 Gene3D - 24 127 IPR038408 -
Lele46g1125 441 MobiDBLite consensus disorder prediction 246 266 - -
Lele46g1125 441 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 264 386 - -
Lele46g1125 441 MobiDBLite consensus disorder prediction 399 423 - -
Lele46g1125 441 ProSiteProfiles Gnk2-homologous domain profile. 25 128 IPR002902 -
Lele46g1125 441 MobiDBLite consensus disorder prediction 246 264 - -
Lele46g1125 441 SUPERFAMILY Protein kinase-like (PK-like) 278 413 IPR011009 -
Lele46g1125 441 Pfam Salt stress response/antifungal 142 240 IPR002902 -
Lele46g1125 441 Pfam Salt stress response/antifungal 35 125 IPR002902 -
Lele46g1125 441 Pfam Protein tyrosine and serine/threonine kinase 279 376 IPR001245 GO:0004672|GO:0006468
Lele46g1125 441 MobiDBLite consensus disorder prediction 403 423 - -
Lele46g1125 441 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 11 253 - -
Lele46g1125 441 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 24 128 - -
Lele46g1125 441 Gene3D Transferase(Phosphotransferase) domain 1 258 387 - -
Lele46g1125 441 ProSiteProfiles Gnk2-homologous domain profile. 135 242 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1125 Lele-ChrLele46 19063742 19067105 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1125 278 441 Receptor kinase-like Gene Family AT4G21410 51.497 6.96e-45 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele46g1125 PK_Tyr_Ser-Thr 1.1e-08 CL0016