Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1124 ATGGCAAGTGCTAAATTTGATTTGGAGAAATTCAATGGAGAAAATGATTTCAGTCTTTGGCGAGTGAAGATGAAAGCCCTACTAGTTCATCAAGGCTTGGGTAGAGCCTTGGAAGGTAGAGACAAGCTGCCACAAAGTCTGACTGATATCGAGAAAACTGAGATCTTGGAAAAAGCACACAGTGCAATTTTGTTGTGCTTGGGAGATGAAATTCTACGGGAAGTGTCAGAAGAAAATACAGCTGCATCACTATGGCTGAAGTTGGAAAGCTTGTACATGACGAGGTCACTCACTAATAGACTGTATTTGAAGAAAAGAATATATACTCTTCACATGCAGGAAGGAAAGCCCATAAAAGAGCACCTGGATGAATTTAACATAATTATTCTTGATCTAAAGAATATTGATGTTAAAATCGATGATGAAGATCAAGCAATTCTTCTATTATGTTCCCTTCCAAGTTCTTATGAGCACTTTATTGACACCATGATGTATGGTCGAGAAGATCTTACCTTGGAGGAAGTCAAAGCTGCGTTGCACTCAAAAGAATTGAAGAAAAGAATATCAGATTCAAAATATGAAGGCTCGGGTGAAGGTCTCTTTGTTAGAGGAAGAACAGAGAAACGGAATCAAAATAGTGGAAGAGGAAGATCCAGATCAAAATCCAAAACAAAACCTCAAAAATATAAATGCTTCCATTGTCACAAGGAGGGGCATATAAGAAAGAATTGTCCAGAGCGCAAAGGCAAGGAAAAGGTATCTGAATCTGGAGATGCGGCTGTAGCAGATAGCTATGATAGTGCAGATGCTCTTGTAGTCTCAGACCATGACTCAAAAGATGAGTGGATTCTTGATTCTGGATGCTCATATCACATGTGTCCTAATAATGATTGGTTTACCACTTACCAACCCTTAGATGGGGGCAAGGTCCTTCTAGGAAATAATGCTCCCTGTAAGGTTGTCGGCATTGGCACAGTTGGAATCAAGATGTTTGATGGAATCGTGAGAACATTGACGGATGTAAGACATGTTCCAGAATTAAAGAAAAATCTGATTTCCTTGGGAACGCTAGATTCAAAAGGTTATAGCTACAAAGGTGAAGGTAGAGCTATAAGAATATCTAAAGGCGCTCTGATTGTGATGAAAGGAAAGAAAGAGAATAGTCTTTATGTGCTACAAGGAAGCACAATTATAGGTACTGCCAATATCTCCTCAGTAGCTGATTCTGATGTCACCAAGTTATGGCATTTGCGAATGGGGCATGTCAGTGAGAGAGGTCTAGCAGAGCTGAGCAAGCAAGGATTACTCTGTGGTCAACAAGCTGGGAAGTTAGATTTTTGTGAACACTGTGTATTTGGAAAACAGTGTCGAATAAAATTCAACACCGCAGTTCATCGAACAAAAGGCACGAAGGTTTGGATCTTCATTTTGAAACATAAAAATGAAGTATTCGTCAAGTTCCAACAGTGGAAAACCTTGATCGAAAAGCAGACTGGAAGGCAGATCAAGCGACTGAGAACTGACAATGGTTTGGAATTCTGTAGCAGAGAATTTGAAAAATTTTGCAAGGATCATGGTATCGTGAGACACCATACAGTGAGGCACACTCCACAACAGAATGGACTTGCAGAACGAATGAACAGAACTTTACTTGAAAGAACTAGATGTATGCTATCAAATGCTGGACTACTAAAAGAATTTTGGGCTGAAGCTGTCAATACAGCCTGTTACTTGATCAACAGATGTCCATCAACGGCCATTGGTTTCAAAACTCCAGAAGAGATGTGGTCAGGTGCTCCTGCCAATTATGAAAATTTAAGGATATTTGGTTGTCCTGCATATGCCCATATCAAAGAAGGAAAACTTGATGCAAGAGCATTTAAATGCATCTTTCTTGGATATCCTCATGGTGTGAAAGGATATAAGTTATGGTTACCAGAGAAAAGAAAATGTATCATCAGCAGGGATGTTACTTTTAATGAAGCTGAAATGCTAGAGCCTCATAAAAAGTCATTAAGTGAAAACAAAGATCCTAATATCTCGAAGAAGGTGGAGCTTGAGGTGGAGCCTGAAAAAGAAAAATTTGTTGATCAAGAAGAAGACCAAGATCCAATTATTGATGCTGATACATCACAATTGCAGCAATATCAGTATGGCTATGCTGACCTGGTGTCATACGCTCTAAATGTTGCTGGTAATATCAATAATTGTGAGCCTCAGTCATATCAAGAAGCTACCGACAGTAAAGAAGTTGCTCAATGGACTGCTGCAATGATAGAGGAAATTGAATCTCTTCATAAGAATCATACTTGGGTTCTTGTTGAAAGGCCAAAGGCTCAGAAGATTGTTGGATACAAATGGATCTTCAAGAAGAAGGAAGGAATCCCTGGAATTGAAGATGCAAGATATAAAGCGCGATTAGTGGCTAAAGGTTTTACACAAAAAGAAGGTATTGATTTCAATGAAGTCTTATCTCCCGTGGTAAAACATAGCTCTATTCGCATTCTACTTGCCATCGTAGCTCAATTTGATCTAGAACTTGAGCAGCTGGATGTCAAGACAGCATTCTTGCATGGCGAACTGGAGGAGCAAATCTATATGAAGCAACCTGAGGGATTTGAAGTCCAAGGGAAGGAAGACCATGTTTGCTTATTGAAGAAATCATTATATGGCCTAAAACAGTCTCCCAGACAGTGGTACAAACGATTTGACACTTTCATGCTTGAAAATGGCTACTGCAGAAGTAAGCATGATAGTTGTGTCTACTATAAGGAGCTTACAAATAAGTCATTCATCTATTTGCTCCTGTACGTTGATGACATGTTGATTGCCTGTAAAAACATGTCTGAAATAAAGAACTTGAAAGCTCAGTTAAGCTCAGAGTTTGAAATGAAGGATTTAGGAGCCGCAAAGAGAATTCTGGGAATAGAGATTCACAGGGATAGAAAAGCAGGGATGCTCTTTCTATCACAAAAGAAGTACATTGAGAAAGTGCTGGAACGTTTTGGCATGCAAAATGCTAAACTTGTCACCACTCCATTGGCGGCCCATTTCAAACTTTCAGTATCTTTTTCACCACAAACTGAGGGTGAGAAGAAGATGTCAGATGTTCCTTATGCTAGTGCAGTTGGCAGTCTCATGTATGCCATGGTGTGCACTAGACCAGATATTTCACAGGCAGTAAGCGTGGTAAGCAAATATATGGCAAACCCTGGTAAAGTTCACTGGAAAGCTGTAAAGTGGATTTTGCGCTACTTGAAAGGTACCACAGATATAGGCCTAGTGTATGAGAAAAACAAAGATGTCAGGAGTAAAATCACCGGATATGTTGACTCAGACTATGCCGGAGATTTAAATAAACGAAGGTCACTTACTGGGTATGTCTTTACACTGTGCAATTGTACTATTAGTTGGAAAGCCACATTACAATCAATTGTTGCTTTGTCTACAACTGAAGCAGAGTACATTGCAACAACAGAAGCTGTAAAGGAAGCTATTTGGGTGAAAGGACTAATTGAAGAGTTGGGTATACAACTGGAAGAAACAACCATTTACTGCGATAGTCAAAGTGCTATACATCTAACAAAGAATCCTATGTATCATGAAAGAACTAAGCATATCGATGTCATAATGCACTTTATCAGAGATATCGTGGAAAGAGGAACTGTTATAGTTGAGAAGATACCCACAGCAAATAATCCAGCAGACATGATGACGAAGCCAGTTACAACAACCAAGTTCAGACATTGTCTGGGCTTGATTAGAGGTAAGCTCTATAATGGAGAAGAAGTTGCAGTTAAAAGGTTATCCAAGAATTCTGGGCAGGGAGATAGAGAATTTAAGAATGAAGTAATGTTGGTAGCCAAGCTTCAACATCGCAATTTAGTTAGACTCCTTGGCTTTTGTCTGGAAAGAGGAGAAAGACTACTCATGTATGAGTTTCTTCCCAATAAAAGTCTTGACTGCTTATTATTTGATCCAAATCCCCGTGCTCATTTGAATTGGGCAACCCGTCACAAAATTATAGTAGGTGTAGCTCGTGGTCTTCTTTATCTTCATGAGAATTCTCGACTTCGAATCATTCATCGTGATATCAAAACAAGCAATATTCTTTTAGATGAAGAGTTGAATCCCAAAATATCAGATTTTGGTATGGCAAAATTATTTGTTGCTAATCAGACTCAGAGTGACACAAGTAAAATTGTTGGAACCTATGGATACATGGCTCCAGAGTATGTGATGCATGGGCAATTCTCAATAAAATCAGATGTCTTTAGTTTTGGTGTGCTAATTCTAGAGATTGTCAGTGGGAAGAAGAAGAACTTTCATGAAAGTAACATACAAGATCTGTTAGACTTTGCATGGAAAAATTGGAGAGGAGGGACAACCTGGAACATAGTAGATCAGGTATTAAAAAAAGGTTCAAGAAATGAAATAATGAGAAGCATCCACATTGGGCTACTATGTGTTCAAGAAAATGTAGCTCTCAGGCCAACCATGGCTTCAGTTTTACAGATGCTTAGTAGCTACAGTTCTTCTCTTCCATTACCATCGCATCCTCCATTTTTACTGAGAAACAATTGCTTACCAGAGATGAACTCTTGGGAGTATAGTTCATCATCAAGGGGCAACAATATCTAA 4641 0.3906 MASAKFDLEKFNGENDFSLWRVKMKALLVHQGLGRALEGRDKLPQSLTDIEKTEILEKAHSAILLCLGDEILREVSEENTAASLWLKLESLYMTRSLTNRLYLKKRIYTLHMQEGKPIKEHLDEFNIIILDLKNIDVKIDDEDQAILLLCSLPSSYEHFIDTMMYGREDLTLEEVKAALHSKELKKRISDSKYEGSGEGLFVRGRTEKRNQNSGRGRSRSKSKTKPQKYKCFHCHKEGHIRKNCPERKGKEKVSESGDAAVADSYDSADALVVSDHDSKDEWILDSGCSYHMCPNNDWFTTYQPLDGGKVLLGNNAPCKVVGIGTVGIKMFDGIVRTLTDVRHVPELKKNLISLGTLDSKGYSYKGEGRAIRISKGALIVMKGKKENSLYVLQGSTIIGTANISSVADSDVTKLWHLRMGHVSERGLAELSKQGLLCGQQAGKLDFCEHCVFGKQCRIKFNTAVHRTKGTKVWIFILKHKNEVFVKFQQWKTLIEKQTGRQIKRLRTDNGLEFCSREFEKFCKDHGIVRHHTVRHTPQQNGLAERMNRTLLERTRCMLSNAGLLKEFWAEAVNTACYLINRCPSTAIGFKTPEEMWSGAPANYENLRIFGCPAYAHIKEGKLDARAFKCIFLGYPHGVKGYKLWLPEKRKCIISRDVTFNEAEMLEPHKKSLSENKDPNISKKVELEVEPEKEKFVDQEEDQDPIIDADTSQLQQYQYGYADLVSYALNVAGNINNCEPQSYQEATDSKEVAQWTAAMIEEIESLHKNHTWVLVERPKAQKIVGYKWIFKKKEGIPGIEDARYKARLVAKGFTQKEGIDFNEVLSPVVKHSSIRILLAIVAQFDLELEQLDVKTAFLHGELEEQIYMKQPEGFEVQGKEDHVCLLKKSLYGLKQSPRQWYKRFDTFMLENGYCRSKHDSCVYYKELTNKSFIYLLLYVDDMLIACKNMSEIKNLKAQLSSEFEMKDLGAAKRILGIEIHRDRKAGMLFLSQKKYIEKVLERFGMQNAKLVTTPLAAHFKLSVSFSPQTEGEKKMSDVPYASAVGSLMYAMVCTRPDISQAVSVVSKYMANPGKVHWKAVKWILRYLKGTTDIGLVYEKNKDVRSKITGYVDSDYAGDLNKRRSLTGYVFTLCNCTISWKATLQSIVALSTTEAEYIATTEAVKEAIWVKGLIEELGIQLEETTIYCDSQSAIHLTKNPMYHERTKHIDVIMHFIRDIVERGTVIVEKIPTANNPADMMTKPVTTTKFRHCLGLIRGKLYNGEEVAVKRLSKNSGQGDREFKNEVMLVAKLQHRNLVRLLGFCLERGERLLMYEFLPNKSLDCLLFDPNPRAHLNWATRHKIIVGVARGLLYLHENSRLRIIHRDIKTSNILLDEELNPKISDFGMAKLFVANQTQSDTSKIVGTYGYMAPEYVMHGQFSIKSDVFSFGVLILEIVSGKKKNFHESNIQDLLDFAWKNWRGGTTWNIVDQVLKKGSRNEIMRSIHIGLLCVQENVALRPTMASVLQMLSSYSSSLPLPSHPPFLLRNNCLPEMNSWEYSSSSRGNNI 1546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1124 1546 SUPERFAMILY Retrovirus zinc finger-like domains 212 250 IPR036875 GO:0003676|GO:0008270
Lele46g1124 1546 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 768 1014 IPR013103 -
Lele46g1124 1546 ProSiteProfiles Protein kinase domain profile. 1222 1522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g1124 1546 SMART c2hcfinal6 230 246 IPR001878 GO:0003676|GO:0008270
Lele46g1124 1546 FunFam Uncharacterized protein 1249 1314 - -
Lele46g1124 1546 Pfam GAG-pre-integrase domain 389 455 IPR025724 -
Lele46g1124 1546 Gene3D Phosphorylase Kinase; domain 1 1240 1314 - -
Lele46g1124 1546 SUPERFAMILY Protein kinase-like (PK-like) 1256 1532 IPR011009 -
Lele46g1124 1546 Gene3D - 444 600 IPR036397 GO:0003676
Lele46g1124 1546 ProSiteProfiles Zinc finger CCHC-type profile. 230 246 IPR001878 GO:0003676|GO:0008270
Lele46g1124 1546 PANTHER GAG-POL-RELATED RETROTRANSPOSON 388 1282 - -
Lele46g1124 1546 SUPERFAMILY Ribonuclease H-like 473 609 IPR012337 -
Lele46g1124 1546 MobiDBLite consensus disorder prediction 199 227 - -
Lele46g1124 1546 Pfam Protein tyrosine and serine/threonine kinase 1260 1505 IPR001245 GO:0004672|GO:0006468
Lele46g1124 1546 SMART serkin_6 1245 1511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g1124 1546 ProSiteProfiles Integrase catalytic domain profile. 430 600 IPR001584 GO:0015074
Lele46g1124 1546 Gene3D - 202 256 - -
Lele46g1124 1546 CDD RNase_HI_RT_Ty1 1107 1244 - -
Lele46g1124 1546 Gene3D Transferase(Phosphotransferase) domain 1 1315 1514 - -
Lele46g1124 1546 Pfam gag-polypeptide of LTR copia-type 57 186 - -
Lele46g1124 1546 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1360 1372 IPR008271 GO:0004672|GO:0006468
Lele46g1124 1546 SUPERFAMILY DNA/RNA polymerases 767 1212 IPR043502 -
Lele46g1124 1546 FunFam cysteine-rich receptor-like protein kinase 10 1315 1514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1124 Lele-ChrLele46 19055433 19062360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1124 1255 1543 Receptor kinase-like Gene Family AT4G21410 60.000 1.10e-111 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele46g1124 PK_Tyr_Ser-Thr 3.4e-40 CL0016