Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1119 ATGAAAACTATCTTTTTTCTGGCTGTGTTTTCGTTATTCCTTTCCCATCTCTTCATCACAGACGCCCAGGAGGAGCTCCACCCTGATTACGTTCATCCCAATTGTTCCATTGACAAAGGAACCTACACAAACACAAGTGCCTACCACACCAACCTCAAAACCCTTCTTTCTAAATTCACCAACAATACAAAAGATGACTATGGCTTCTACAATTCCTCGTACGGCCAAAACCCTGACACGGTTTTCGCATCCGCACTCTGCCGAGGAGATGTTACACCAGATGTTTGCCGGAGTTGCCTCAATAATGCCACAAATCTTCTCCCCCAGAACTGTACAAATCAGAAGGAGGCATTTTTGTACTATGACTTCTGCATCTTTCAATACTCAAGTAGCTCAATGTTTGGGATCTACAAGGACCCTGATTTTTCCAACGCAATTAATAATAATGAAGATGCAGCAGATGCAGACAAGTACACAGATGCACTTAATCGGCTAATGGAAGTTCTTAAGACCAACGCCGCAGCCGGTGGCCCTCATCGTAAGGTGGCTGCCGGAAACGCCTCGGCCGCATTCCAATATGTGTTTGGTCTTGCTCAATGCACGCCTGATTTGACTCAGCAAGATTGTGAAGCTTGCTTGGAAAATGCCATCTCAGATATTCCACTCTGTTGTCAGAACAAGGTTGGTGGTAGGGTTATAAAAAAGAACTGCAATCTTAGGTTTGAGAAGGTCAGGTTCTATAATCCTACAGTTGTTGATCCAATACAATTATCTCCATCTCCTCCTCCTCTTGATCCTACTACTAATACTAGTTCCACGCAAGGACCTCCTGGTTCACCTAACGTTCCATCTTCCAAAGAAGGAAAAAACAATGGATCAAGAACCATTATTATTATCGTGGCTGTGGTGTTTGGTGCCTTATTTTTCGCCCTTCTCATCTTGATTTTCATCTATTTTGCAATCAGGAAATCGAAGAAAACCGTTGAAAATGAAGCTGAAATAAAGGATGATGAGGAAATTAAACCATCTGATTCGTGGCAATTTGACTTTGAAACCATCAAAATCGCTACAGATAACTTCTCGATGGCAAATAAACTTGGACAAGGAGGATTTGGGCCAGTATATAAGGGTAAGCTTCGTAATGGACAAGAAGTTGCTGTCAAAAGGCTGTCCATGAATTCTGGTCAAGGAGATTTAGAATTCAAGAATGAAGTGTTATTGATGGCCAAGCTTCAACATCGCAATTTAGTAAGGTTACTTGGTTTCTGTTTAGAAGGAATAGAAAGGCTACTCATATATGAATTTCTTCCCAATAGAAGCCTTGATTACTTATTATTTGATCCAATCCAGCGTACTCATTTGCATTGGGAGGTGCGGTACAAAATTATAGTTGGCATTGCACGTGGCATTCTCTATCTTCATGAAGATTCAAGATTACGCATTATTCATCGAGATCTCAAAGCAAGTAATATTCTTCTAGATAGAGAGATGAACGCAAAAGTGGCAGATTTTGGCATGCCAAGATTATTTGATATAGATCAAACTCAAAGCAAGACCAGTAAAATTGTTGGAACTTACGGATACATAGCACCAGAATATGCAATGCATGGACAAATATCAACAAAATCAGATGTCTTCAGTTTTGGTATACTGGTTCTTGAGATTATAAGCGGCCAGAAAAATAGTAGCGTGGTTGACGAGGAGAATATACAAGATCTTTTAAGCTTTGTATGGAAAAATTGGAGGGAAGGGACAGCCTCAAATGTAATAGATACTGTGATAAGCAAGGGTTCAAGGGACGAAATAATGAGATGCATTCACATAGCATTACTGTGCGTTCAAGAAAATGTAGGAGACAGGCCTACCATGGCTTCTGTTGAACTTATGCTAAACAGCTACTCTTCGTCTCTCCCTTTACCTTCGCGGCCTCCGTGTTTAATGAATTTCAGCACTACGCTTGAGATGCAACCCAGAGAGGAAAATGAAGGAGACGAAGCACGTAGCTCTGCTCAACAAGCATAA 2022 0.4105 MKTIFFLAVFSLFLSHLFITDAQEELHPDYVHPNCSIDKGTYTNTSAYHTNLKTLLSKFTNNTKDDYGFYNSSYGQNPDTVFASALCRGDVTPDVCRSCLNNATNLLPQNCTNQKEAFLYYDFCIFQYSSSSMFGIYKDPDFSNAINNNEDAADADKYTDALNRLMEVLKTNAAAGGPHRKVAAGNASAAFQYVFGLAQCTPDLTQQDCEACLENAISDIPLCCQNKVGGRVIKKNCNLRFEKVRFYNPTVVDPIQLSPSPPPLDPTTNTSSTQGPPGSPNVPSSKEGKNNGSRTIIIIVAVVFGALFFALLILIFIYFAIRKSKKTVENEAEIKDDEEIKPSDSWQFDFETIKIATDNFSMANKLGQGGFGPVYKGKLRNGQEVAVKRLSMNSGQGDLEFKNEVLLMAKLQHRNLVRLLGFCLEGIERLLIYEFLPNRSLDYLLFDPIQRTHLHWEVRYKIIVGIARGILYLHEDSRLRIIHRDLKASNILLDREMNAKVADFGMPRLFDIDQTQSKTSKIVGTYGYIAPEYAMHGQISTKSDVFSFGILVLEIISGQKNSSVVDEENIQDLLSFVWKNWREGTASNVIDTVISKGSRDEIMRCIHIALLCVQENVGDRPTMASVELMLNSYSSSLPLPSRPPCLMNFSTTLEMQPREENEGDEARSSAQQA 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1119 673 CDD STKc_IRAK 366 631 - -
Lele46g1119 673 ProSiteProfiles Gnk2-homologous domain profile. 30 133 IPR002902 -
Lele46g1119 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Lele46g1119 673 FunFam Cysteine-rich receptor-like protein kinase 28 436 638 - -
Lele46g1119 673 ProSiteProfiles Gnk2-homologous domain profile. 140 246 IPR002902 -
Lele46g1119 673 FunFam Cysteine-rich receptor-like protein kinase 10 322 435 - -
Lele46g1119 673 Pfam Protein tyrosine and serine/threonine kinase 362 626 IPR001245 GO:0004672|GO:0006468
Lele46g1119 673 MobiDBLite consensus disorder prediction 255 289 - -
Lele46g1119 673 ProSiteProfiles Protein kinase domain profile. 360 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g1119 673 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 28 133 - -
Lele46g1119 673 MobiDBLite consensus disorder prediction 267 289 - -
Lele46g1119 673 Gene3D Phosphorylase Kinase; domain 1 320 435 - -
Lele46g1119 673 SMART serkin_6 360 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g1119 673 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 34 661 - -
Lele46g1119 673 Gene3D - 29 132 IPR038408 -
Lele46g1119 673 Gene3D - 140 246 IPR038408 -
Lele46g1119 673 Gene3D Transferase(Phosphotransferase) domain 1 436 637 - -
Lele46g1119 673 FunFam Cysteine-rich receptor-like protein kinase 10 142 246 - -
Lele46g1119 673 Pfam Salt stress response/antifungal 152 243 IPR002902 -
Lele46g1119 673 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Lele46g1119 673 SUPERFAMILY Protein kinase-like (PK-like) 348 653 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1119 Lele-ChrLele46 19025831 19029180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1119 1 647 Receptor kinase-like Gene Family AT4G21410 48.265 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele46g1119 PK_Tyr_Ser-Thr 4e-46 CL0016