Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1118 ATGAGATATGCTGGTACGACCAGGGGATCTACAATAACCGCAAGAGCTTCGACATCTTCCACAATCGACCACAACGCTTTCCCTTCTGCTGTTGCTGCTACTGCTCGCCTCATTTCTCAACCTCCCGGCCATTTCCAAGTCCTTCTTCGTAAGCTCAATTCTTCACCAGATTCTTCATATAAGGAAGGGAAGATGGAGATAATGGAATTGACACGACAAAGAACTGAAGGTAGACCTGCGACGTCGGTGCAGCAAAGAATAGAGCCGAGCAGTGGCTTGCGGTGGCTAGGTTTCGAAGTCGAAGAAGAAAACAAGCGTGGAGAAGAAGAGGAAATACTGATCGAAGAACTTGAGGTTCTAACAACTTCAATTTTCTTGGCTCTAATTTCACTCCTTTCTCATCATCTTCTTCTTCCTCTCACCGCCCAGCCTGACGACTTCGTTTTCCACAAGTGCTTCAATGAAAGTGGTAACTACACAAAACCAAGTACCTACCACACCAACCTCAATACCCTTCTTTCTAAATTCACTTCTGATACCAAAATTGACTATGGCTTCTACAATTCCTCTTATGGTGAAACCCCCGACGTGGTTAACGCACTTGGAATGTGCAGAGGAGATGTGAAGTCAGATTCTTGTCGTAGTTGTCTCAACAATGCCATAACCCTTCTTCCAAACCAATGTCCATATCAGAAAGAAGCATTCGGATACTATGATTTATGCATGCTTCGATACTCGATTCGTGCAATGTTTGGGATTTACCAGGACCATGACTTTTACAAGTTTTCTAGCAACCTTACTAATGTAGCAGATGCAAACAAATACAATGTTGCGCTTAATGATCTGATGAAAAGTCTAAGAGACAAGGCTAAGGTTGGTGATGAATCTCATGATCGTAAGGTGGCTGCGGGAAACGCAAAAGCTGATGATGATGAAGCTGTGTATGGTCTTGTTCAGTGCACGCCTGATTTGAATGAGCAAGATTGCTTCGATTGTTTGAAGGATTCTATTTTTTATATCCCAAATTGTTGTCAGGACAAGGTTGGTGGGAGGGTTATCAGATTGAGCTGCAATATTAGATTTGAGAATTTCTTATTCTTTGATCCTTCACTTGTTGATTCAATACAATTACCTTTCTCCCCTCCATCAACAAATACAACTTCCTCACAAGGAAGGAGCCATAAATCAAGAACTACCATTATTGTACCTGTGCTGATTATTGGTGCCTTTATCGCCTTTCTCTTAGTATTCTTCATAGTTAGAAGATCAAAGAAAAACCATGAAATTGAATCTACAACAAAGGATGATGATGATTTAATTAAACCAACTGAGATGTTGCAAATCGATTTTAACACCATCAAGCTCGCAACTGATAACTTCTCTGATGCAAATAAGCTTGGACAAGGAGGATTTGGGCCTGTGTATAAGGGTCTGCTTCCTGATGGACAAGAAGTTGCTGTGAAAATGTTGTCCAAGAATTCTAGTCAAGGAGATTTAGAATTTAAGACTGAAGTGATGTTGGTAGCTAAACTTCACCATCGGAATTTAGTAAGACTACTTGGTTTCTGTTTAGAAAAGACAGAAAAGCTACTCGTCTATGAATTTCTTCCTAATAGAAGTCTTGATTTCTTCTTATTCTATCCAAAGCAGCAAACTCATTTGAATTGGCTGGTACGATACAAGATTATAAGAGGAATTGCTCGTGGCCTACTTTACCTTCATCAAGATTCAAGATTACGTATTATTCATCGTGATCTCAAAACGAGTAATATTCTCTTAGATGAAGAATTAAATCCAAAAATATCAGATTTTGGTACCGCAAGACTATTTAAGATGGATCAAACTCGAAGCAATACTAACCGAATTGTTGGAACCTTCGGTTACATGGCACCAGAATATGTATTGTATGGTCAATGTTCAATAAAATCAGATGTCTATAGTTTTGGCATATTGGTTCTAGAGATCATAAGTGGCAAGAAAAACAACAGCACATTTCAAGTGGAGAATACACAGGATCATCTTGATCTATTAAGTTTTGTATGGAAAAATTGGAGGGAAGGGACAGCCTCAAATGTAGTAGATCCTGTGATAAGCAATGGTTCAAGGAACGAAATAACGAGATGCATCCACATAGCATTGCTGTGCGTTCAAGAAAATGCAGCTGATAGGCCAAGCATGGCCTCAGTCTCATTTATGCTCAACAGCTTCTCTTCCTCTCTCCCTTTACCTTCGGAACGTCGATTTCTTGTGAATTACAGCAGTTCATCTGAGACAATGACGACTTTGAGACATAACAGTTCATCAGAGAAGACAAGAAGATCAAGTGAACAAGGAAGGAGTAACTCTAATGAACCATCATTAAATGAGTTATCCATTACGGAACTATATCCTCGCTAG 2397 0.398 MRYAGTTRGSTITARASTSSTIDHNAFPSAVAATARLISQPPGHFQVLLRKLNSSPDSSYKEGKMEIMELTRQRTEGRPATSVQQRIEPSSGLRWLGFEVEEENKRGEEEEILIEELEVLTTSIFLALISLLSHHLLLPLTAQPDDFVFHKCFNESGNYTKPSTYHTNLNTLLSKFTSDTKIDYGFYNSSYGETPDVVNALGMCRGDVKSDSCRSCLNNAITLLPNQCPYQKEAFGYYDLCMLRYSIRAMFGIYQDHDFYKFSSNLTNVADANKYNVALNDLMKSLRDKAKVGDESHDRKVAAGNAKADDDEAVYGLVQCTPDLNEQDCFDCLKDSIFYIPNCCQDKVGGRVIRLSCNIRFENFLFFDPSLVDSIQLPFSPPSTNTTSSQGRSHKSRTTIIVPVLIIGAFIAFLLVFFIVRRSKKNHEIESTTKDDDDLIKPTEMLQIDFNTIKLATDNFSDANKLGQGGFGPVYKGLLPDGQEVAVKMLSKNSSQGDLEFKTEVMLVAKLHHRNLVRLLGFCLEKTEKLLVYEFLPNRSLDFFLFYPKQQTHLNWLVRYKIIRGIARGLLYLHQDSRLRIIHRDLKTSNILLDEELNPKISDFGTARLFKMDQTRSNTNRIVGTFGYMAPEYVLYGQCSIKSDVYSFGILVLEIISGKKNNSTFQVENTQDHLDLLSFVWKNWREGTASNVVDPVISNGSRNEITRCIHIALLCVQENAADRPSMASVSFMLNSFSSSLPLPSERRFLVNYSSSSETMTTLRHNSSSEKTRRSSEQGRSNSNEPSLNELSITELYPR 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1118 798 ProSiteProfiles Protein kinase domain profile. 460 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g1118 798 ProSiteProfiles Gnk2-homologous domain profile. 257 366 IPR002902 -
Lele46g1118 798 Gene3D - 257 366 IPR038408 -
Lele46g1118 798 Gene3D - 145 249 IPR038408 -
Lele46g1118 798 Gene3D Transferase(Phosphotransferase) domain 1 536 743 - -
Lele46g1118 798 SUPERFAMILY Protein kinase-like (PK-like) 445 764 IPR011009 -
Lele46g1118 798 FunFam Cysteine-rich receptor-like protein kinase 10 260 366 - -
Lele46g1118 798 Pfam Protein kinase domain 461 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g1118 798 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 149 797 - -
Lele46g1118 798 SMART serkin_6 460 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g1118 798 Gene3D Phosphorylase Kinase; domain 1 420 535 - -
Lele46g1118 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 581 593 IPR008271 GO:0004672|GO:0006468
Lele46g1118 798 Pfam Salt stress response/antifungal 267 363 IPR002902 -
Lele46g1118 798 Pfam Salt stress response/antifungal 152 246 IPR002902 -
Lele46g1118 798 FunFam Cysteine-rich receptor-like protein kinase 28 536 741 - -
Lele46g1118 798 MobiDBLite consensus disorder prediction 759 798 - -
Lele46g1118 798 ProSiteProfiles Gnk2-homologous domain profile. 147 250 IPR002902 -
Lele46g1118 798 CDD STKc_IRAK 466 734 - -
Lele46g1118 798 FunFam Cysteine-rich receptor-like protein kinase 10 421 535 - -
Lele46g1118 798 Coils Coil 100 120 - -
Lele46g1118 798 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 145 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1118 Lele-ChrLele46 19018135 19021896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1118 124 759 Receptor kinase-like Gene Family AT4G21410 46.154 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele46g1118 Pkinase 3.6e-46 CL0016