Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1116 ATGTGTAATCGTACAGGAGGAAGAGACAGTAAATCACAAACTGATGTCAAGATTATCGTCCCCATCGTAGTTTCAGTGGCAATTTTTTGTTTGGTGGGCTGCTATCTACTAAGGAGAAAAATGACAAGGAAGAGAAACCAGGCTATCCTTAGAGAAAACTTTGGCGAAGATAGTTCATACCTGAAGTCCTTGCAATTTAGTTTGGCAACAATTGAAGTTGCAACAAATAAGTTTTCTGAAGAGAACAAAATAGGAAAAGGTGGATTTGGAGAAGTTTATAAGGGCGTTCTTCCTGATGGACGAGAAATTGCTGTAAAAAGACTTTCTAAAAGTTCAGGGCAAGGAACATTAGAATTCAAGAATGAAATATTATTGATAGCCAAACTTCAACATAGAAATTTGGTGACCTTGTTGGGATTTTGTTTGGAAGAGCAAGAGAAAATTCTCATTTATGAATATGTTCCGAACAAGAGCATTGATTTCTTTTTGTTTGAAGCTAGTTCGAATCAAATAAGTCAGAGCTCCAAGACAGCGGTTTCATCAAATGAAACATCTATCACTGATGAGATCTTGCCTCGATGA 582 0.3677 MCNRTGGRDSKSQTDVKIIVPIVVSVAIFCLVGCYLLRRKMTRKRNQAILRENFGEDSSYLKSLQFSLATIEVATNKFSEENKIGKGGFGEVYKGVLPDGREIAVKRLSKSSGQGTLEFKNEILLIAKLQHRNLVTLLGFCLEEQEKILIYEYVPNKSIDFFLFEASSNQISQSSKTAVSSNETSITDEILPR 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1116 193 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 9 169 - -
Lele46g1116 193 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 38 153 - -
Lele46g1116 193 Gene3D Phosphorylase Kinase; domain 1 38 153 - -
Lele46g1116 193 ProSiteProfiles Protein kinase domain profile. 78 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g1116 193 SUPERFAMILY Protein kinase-like (PK-like) 57 169 IPR011009 -
Lele46g1116 193 Pfam Protein tyrosine and serine/threonine kinase 81 179 IPR001245 GO:0004672|GO:0006468
Lele46g1116 193 ProSitePatterns Protein kinases ATP-binding region signature. 84 106 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1116 Lele-ChrLele46 18993936 18995502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1116 16 165 Receptor kinase-like Gene Family AT4G23190 55.333 1.01e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele46g1116 PK_Tyr_Ser-Thr 8.8e-16 CL0016