Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1104 ATGGGTTGCTTGTCCTGTTGCATTACCCCGTCTCAGAAAGCCGTCGATACAGATGGTCAAACAGAAGTTTCGAAACGCAGGGCAGACTTCAAATCCTATACATTGAAATCAATTGTTTCAACTATTTCACTCAAGACAGGTAGCAGCAGGACGAGAAGGATAAACGCAGAGATACAGAAACATGGAACTGCAAAAAATGAAGCAAAAGTTTTCACATACAAAGAACTCGGTGATGCAACTGACGGTTTCATTGATGAACACAGAATAGGAGAGGGGGGATTCGGGGTCGTCTACAAAGGACGCATAGAAAGCATTGATCAAGTTGTGGCTGTGAAGCAACTGGACAGACAAGGAAGGCAAGGAACTAGAGAATTTATTTCAGAGGTTTTGATGTTAAGCTTGTTGAAGCATCAAAACCTTGTCAATTTGATTGGTTATTGTATTGAAGACGACCACAGGATCTTGACCTACGAATTCATGTCTAATGGGAGTCTAGAAGATCACCTTCTAGACTTGGCTCCAGATAAGGTACCTTTATCTTGGGATAGGAGGGTGAAAATAGCTGAGGGAGCTGCAAGAGGGCTTGAGTATCTACATGAAATTGCTAAGCCAACAGTAATATACCGTGATTTTAAAGCATCAAATATACTGTTAGATGATGATTTCAATCCCAAGCTTTCCGATTTTGGAATGGCTAAGATGGGTCCAGCACAAGGCCAACTTTTTATCAACACAAGGGTCATGGGAACCTATGGATATTGTGCACCAGAGTATGCTGCCACCGGCCAGCTAACGCACAAGTCTGATGTTTATAGCTTTGGGGTTGTGCTTTTGGAGATAATCTCTGGCAGAAGAGTTATTGATGTTACAAGAGCAGCGGACGAGCAGAACCTGATCCAATGGGCACGACCTCTGTTTAAGGAAAGAAGCATGTTTACTCAAATGGCTGACCCCTTGCTTCATGGTAACTACCCTGAGAAGAGTCTATGTCAAGCACTTGCAGTGGCAGCAATGTGTTTGCAAGATGAAGCGGACGCAAGACCTTCAATGGGTGAGGTTGTGGAAGCTCTTGTGCTTCTATCAAGGCCAAAAGATAGAGAATCATAG 1107 0.4336 MGCLSCCITPSQKAVDTDGQTEVSKRRADFKSYTLKSIVSTISLKTGSSRTRRINAEIQKHGTAKNEAKVFTYKELGDATDGFIDEHRIGEGGFGVVYKGRIESIDQVVAVKQLDRQGRQGTREFISEVLMLSLLKHQNLVNLIGYCIEDDHRILTYEFMSNGSLEDHLLDLAPDKVPLSWDRRVKIAEGAARGLEYLHEIAKPTVIYRDFKASNILLDDDFNPKLSDFGMAKMGPAQGQLFINTRVMGTYGYCAPEYAATGQLTHKSDVYSFGVVLLEIISGRRVIDVTRAADEQNLIQWARPLFKERSMFTQMADPLLHGNYPEKSLCQALAVAAMCLQDEADARPSMGEVVEALVLLSRPKDRES 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1104 368 Gene3D Phosphorylase Kinase; domain 1 43 159 - -
Lele46g1104 368 SUPERFAMILY Protein kinase-like (PK-like) 66 360 IPR011009 -
Lele46g1104 368 Gene3D Transferase(Phosphotransferase) domain 1 160 367 - -
Lele46g1104 368 ProSiteProfiles Protein kinase domain profile. 83 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g1104 368 FunFam Serine/threonine-protein kinase PBS1 160 368 - -
Lele46g1104 368 PANTHER OS07G0668900 PROTEIN 28 364 - -
Lele46g1104 368 FunFam serine/threonine-protein kinase PBS1-like 49 159 - -
Lele46g1104 368 Pfam Protein kinase domain 85 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g1104 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Lele46g1104 368 CDD STKc_IRAK 89 357 - -
Lele46g1104 368 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1104 Lele-ChrLele46 18897310 18899399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1104 1 365 Glycoside Hydrolase AT3G07070 57.534 3.30e-145 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele46g1104 Pkinase 9.3e-47 CL0016