Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1092 ATGGGTATATGCGGCTGTTCGACAGATATCCCTGAGCACTTCATTTTAGAAGCCAAAGAGAATACCTCGTCAATCTTTGCACTGTTGCATACCTATGGTTTTGCTTCTTCTTGTTTTTCACTCAGGACTTTCATCAAACATATCGCATACAACAAGAAAAACGAAGACATGAACGAAACAATTGGGAGGAATTCTAGTTTTGTACAGCATCAAGTTTCTATACTTTGGAGGCTTGTTGTGATGGAGGTGAAGAACATGAGCAACTCAGATCATACGAGCAAAGTTGGCATTGGCCATGATGTTGATGCCAAAGAGACAAGAGCTGAGGATGCTCATCAGCAGCTGGAATTCTCTGAAGATGAGGAAGCTCTCGTTGCTAGAATGTTCAGATTGGTTGGCAACAGGTGGCCTTTGATTGCTGGGAGGATACCTGGAAGAACTGCTCAAGAGATAGAGGAGTACTGGACTTCTAAATTTGAGCCCCTCATCATTGCTTTTGAGTGCAAAGACCTCTCTTCGGCTCAGTCGCTTGTTTCTTTGGCTATATCTTGTGGGTTCAGAGAGTCGGGCTTTACTAATGCTAACAAGCGTGTGATTATAGCAATTCGGTGTTCGATAAGATTAGAGGTGCCTCTAGGGGATACTCACAAGATTATGGTGCCGCCTGAGTATGTTCGGTACCTTGTTCAAGTCGCGAATGAGGAAATGGAAGTAAATAGGAAGAGAACCGAAAGGCTTTTTGGATTGTTGCAGTCCAATGGCTTTGTAGGATCTATGGCTGCGGATAATAGTGATATTATGTCTATAAATGAGTCATTGAATCCTACTAATGTTTCCGTGCATGGTGAAGGTCTTGCTTGTGATAATGCTGAAGGTGGAGATGGTGATGAGTTAGAAAAGACTAATGGTGAAACCTCTTCAGGGCTTGTGGAAATTCGTGGTTGTAGTCCGCAGATTGTCCATATTGAAACTGTTGGTGAACCAGTGGAAAAGCTTTTCCTTTGTGGTCATTCTGCTTGTGCATTGGATAATGCCAGCCACAACAAAGTAGTTGTGTTTGGTGGCTTTGGATGCATGGGGAGACATGCAAGAAGAAATGATTTATTGCCGCTTGATCCATATTCTGGTACTCAGGGAACAATCAGAACTGTTGGTGATTCATCGTTATCTCCACGCCTAGGCCATACATCTTCCCTCGTTGGGGGTCACATGTTCTTGATTGGAGGCCGGAGTGGCCCTGATAAGATTCTGAGTGAAATCTTCATGTTAGGTGGATACAATGGTGCAAAAGCACTTGATCTGTATAGCTTTGATATTCAGAAGGGTCAATGGAAGAAGGAAAAGACAGCCAGAAGGAATCCCCATGCTAGGTTTTCCCACTCAATGTTTGTGTATAAAAATTATCTTGGAGTTATTGGTGGTTGTCCAGTTAGACAGCATTTTCAAGAGTTGGCTTTACTTGATTTGCAGCTTCGGCAATGGCAGTGTGTAATCCTTAATTCTGTCGGCAAAGATTTATTTGTGCGCAGTACAGCTTGTGTCAGTGGTGATGACCTTGTTATGGTTGATGGTGGTGCATCTTGCTATGCGTTTGAAACAAAGTTTAGTGAGCCAGCAAAAGTTAGTTTGCTCCATTTAATGCCTTCTTATGATAATCATATTGATGTTAAAAACAAAACAAAGCACATGAATAATCAAAATGATGTGGAAAATAAGACTAAGATTCAAAATTTCGAAGAACCACAACTTGAGGATGTACCAGATATAGCAGACAGTGGTAGCACGCATCTTGATGATGAAACACCTGTCACAAATGACCAATTTCAGATGGCTACGTCACATTATGTTCTGAAGCTAGACAAGAGATTTGCAAAATTAGGGAAGGATATATTGAAGGAATTTGGATGGTTGGACCTAGGTAGGAAAGCATACTCACAGGAGGATGGATTACATATCTGTTTTCCTGTAATTAATGATTTTTTTCATATATTTCATGAAAGGAAGAATCATTCAGGAGACACAGTTGAAGGAAAAGATGAAGTCGACTTCTCCAAGCCATCTAAAGGAAACGGATGCATATTGAATGACTTATCCGATCCAAAAGCCTTAAGTCTTTTACTTGAATGTGGTGCAAACATACAGGAAGATGAAGTTGTTGAAACAAAAAATGCTGCAAAAACTCCTTTGAAAGTGATGACTGAAGCAATAACAACTTTGATTGAGCATCACAGCCTACCTTCACAGCTGCTAGAGGAATTACCATTCTGCTATATTTCTATTAATTTTCTTTTGTGGGATAGACTTGGAGATATTGTTATACTTCCAAATACGTCTTTCAAAGATCCAATGTGGAACTCCATTGCAGAAGAGCTTTGGCCCACTGTTGCCAAATCACTTAAGGCTAATTATCTTGCTCGCCAGGGCCCAGTTGCAGCAAACGGTACAAGAGATAGTACATTGCAGATTCTTGTTGGAGATAATGGATGGGTTGACCGTCGCGAAAATGGAATACTCTATTCTTTTGATGCTAGCAAGCGCATGTTCTCATGGGGGAATCTTTCTGAGAAGCTTCGGATGGCCCGATTAGATTGTTGGGATGAGATTATAGTAGACCTGTTTGCAGGCATTGGATACTTTGTGCTGCCATTTCTTGTCAGGGCCAAAGCAAAATTTGTATATGCTTGTGAATGGAATCCCCATGCCATAGAGGCACTCCAACATAATCTGAAAGCAAATTCTGTGGCTGACAAATGTCTCATCCTTGAGGGAGATAATCGAAGTTTTGTTATTTCAATCTTGCTAACACATTGGAGTGAAGGTGGAGTACTACACGTTATTGTTGGGAAGTTTCTATAG 2856 0.4111 MGICGCSTDIPEHFILEAKENTSSIFALLHTYGFASSCFSLRTFIKHIAYNKKNEDMNETIGRNSSFVQHQVSILWRLVVMEVKNMSNSDHTSKVGIGHDVDAKETRAEDAHQQLEFSEDEEALVARMFRLVGNRWPLIAGRIPGRTAQEIEEYWTSKFEPLIIAFECKDLSSAQSLVSLAISCGFRESGFTNANKRVIIAIRCSIRLEVPLGDTHKIMVPPEYVRYLVQVANEEMEVNRKRTERLFGLLQSNGFVGSMAADNSDIMSINESLNPTNVSVHGEGLACDNAEGGDGDELEKTNGETSSGLVEIRGCSPQIVHIETVGEPVEKLFLCGHSACALDNASHNKVVVFGGFGCMGRHARRNDLLPLDPYSGTQGTIRTVGDSSLSPRLGHTSSLVGGHMFLIGGRSGPDKILSEIFMLGGYNGAKALDLYSFDIQKGQWKKEKTARRNPHARFSHSMFVYKNYLGVIGGCPVRQHFQELALLDLQLRQWQCVILNSVGKDLFVRSTACVSGDDLVMVDGGASCYAFETKFSEPAKVSLLHLMPSYDNHIDVKNKTKHMNNQNDVENKTKIQNFEEPQLEDVPDIADSGSTHLDDETPVTNDQFQMATSHYVLKLDKRFAKLGKDILKEFGWLDLGRKAYSQEDGLHICFPVINDFFHIFHERKNHSGDTVEGKDEVDFSKPSKGNGCILNDLSDPKALSLLLECGANIQEDEVVETKNAAKTPLKVMTEAITTLIEHHSLPSQLLEELPFCYISINFLLWDRLGDIVILPNTSFKDPMWNSIAEELWPTVAKSLKANYLARQGPVAANGTRDSTLQILVGDNGWVDRRENGILYSFDASKRMFSWGNLSEKLRMARLDCWDEIIVDLFAGIGYFVLPFLVRAKAKFVYACEWNPHAIEALQHNLKANSVADKCLILEGDNRSFVISILLTHWSEGGVLHVIVGKFL 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1092 951 Gene3D - 330 543 IPR015915 GO:0005515
Lele46g1092 951 SMART sant 113 161 IPR001005 -
Lele46g1092 951 ProSiteProfiles SAM-dependent methyltransferase TRM5/TYW2-type domain profile. 765 951 IPR030382 -
Lele46g1092 951 SUPERFAMILY Kelch motif 332 527 IPR015915 GO:0005515
Lele46g1092 951 Gene3D - 763 825 - -
Lele46g1092 951 ProSiteProfiles Myb-like domain profile. 117 159 IPR001005 -
Lele46g1092 951 CDD SANT 116 155 IPR001005 -
Lele46g1092 951 Gene3D - 135 256 IPR036602 -
Lele46g1092 951 Gene3D Vaccinia Virus protein VP39 828 949 IPR029063 -
Lele46g1092 951 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 117 163 IPR017930 -
Lele46g1092 951 PANTHER TRNA METHYLTRANSFERASE 543 931 - -
Lele46g1092 951 SUPERFAMILY SSo0622-like 150 250 IPR036602 -
Lele46g1092 951 SUPERFAMILY Homeodomain-like 117 160 IPR009057 -
Lele46g1092 951 Pfam Myb-like DNA-binding domain 116 156 IPR001005 -
Lele46g1092 951 CDD AdoMet_MTases 869 946 - -
Lele46g1092 951 Coils Coil 101 121 - -
Lele46g1092 951 Pfam Met-10+ like-protein 765 932 IPR030382 -
Lele46g1092 951 Pfam Methyltransferase TYW3 110 250 IPR003827 -
Lele46g1092 951 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 764 929 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1092 Lele-ChrLele46 18786045 18797272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1092 117 176 MYB Transcription Factor Family AT5G14750 41.667 1.38e-10 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele46g1092 Met_10 8.9e-29 CL0063