Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1091 ATGTCTTGCTCCAATCTGACAATGTGGGTTTCTTCGAAACCTTCATTATCCGATGCTTCTTCCTTCTCCTTCCGCGCATCAATTAACCCCTTTTTCCACGTTCCTTCTCAGAACCCATCTCCTTCGCGATCCTCTGCGACGCAAATCCAGTGTGGTCTCCGTGAGCTCAGAGGCCGAATTGAATCTGTGAAGAACACCCAGAAAATCACAGAGGCCATGAAGCTCGTCGCCGCCGCGAAAGTCAGAAGAGCTCAAGAAGCTGTCGTTAATGGAAGACCTTTCTCTGAGACCCTTGTCGAAGTCCTTTACAACATCAACGAGCAGCTCCAAACTGAAGACGTCGACGCTCCTCTCACAAAAGTTCGACCTGTTAAGAAGGTGGCTTTGGTTGTCTGTACTGGAGATCGAGGTCTCTGCGGTGGTTTCAATAACCAAATCATTAAAAAAGCTGAAGCAAGAATCGCAGAATTGAAGAGTCTGGGTCTTAATTATACCGTCATTAGCGTTGGGAAAAAGGGTAATTCGTATTTCATTCGTAGGCCTTATATCCCAGTGGATAGATTTCTCGAACAAGGATCTCTTCCGACTGCAAAAGAAGCTCAAGCCATTGCTGATGATGTTTTCTCTCTATTTGTAAGTGAAGAGGTTGATAAGGTTGAGTTATTATACACAAAGTTTGTGTCTTTAGTGAAATCCGATCCTGTGATTCATACCCTGCTTCCTCTGTCACCAAAAGGAGAGATCTGTGATGTGAATGGTGTCTGTGTGGATGCTGCTGAAGATGAGTTCTTTAGGTTGACTACAAAGGGAGGGAAGTTGACTGTTGAGAGAGATGTTATGAGGACCAAGACAGACGATTTCTCCCCTATTTTGCAGTTTGAGCAGGACCCAGTTCAGATTCTTGATGCCTTATTGCCACTGTATTTGAATTCTCAGATTCTTAGAGCATTGCAGGAGTCACTAGCCAGTGAGCTAGCTGCCAGAATGAGTGCTATGAGCAATGCTACTGATAATGCGGTGGAATTGAAGAGGAACTTGTCAAGAGTATACAACAGGGAACGTCAAGCCAAGATCACAGGTGAAATTCTGGAAATTGTTGCTGGTGCCAATGCCCTAACATAG 1122 0.4483 MSCSNLTMWVSSKPSLSDASSFSFRASINPFFHVPSQNPSPSRSSATQIQCGLRELRGRIESVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTEDVDAPLTKVRPVKKVALVVCTGDRGLCGGFNNQIIKKAEARIAELKSLGLNYTVISVGKKGNSYFIRRPYIPVDRFLEQGSLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDVNGVCVDAAEDEFFRLTTKGGKLTVERDVMRTKTDDFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNAVELKRNLSRVYNRERQAKITGEILEIVAGANALT 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1091 373 ProSitePatterns ATP synthase gamma subunit signature. 358 371 IPR023632 -
Lele46g1091 373 Coils Coil 332 352 - -
Lele46g1091 373 FunFam ATP synthase gamma chain, chloroplastic 269 372 - -
Lele46g1091 373 Gene3D - 119 243 - -
Lele46g1091 373 Gene3D ATP synthase, gamma subunit, helix hairpin domain 272 372 - -
Lele46g1091 373 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 52 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lele46g1091 373 CDD F1-ATPase_gamma 53 369 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lele46g1091 373 Gene3D ATP synthase, gamma subunit, helix hairpin domain 52 118 - -
Lele46g1091 373 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 52 372 IPR035968 GO:0015986|GO:0045261|GO:0046933
Lele46g1091 373 Pfam ATP synthase 53 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lele46g1091 373 PANTHER ATP SYNTHASE GAMMA CHAIN 5 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lele46g1091 373 FunFam ATP synthase gamma chain, chloroplastic 120 243 - -
Lele46g1091 373 Hamap ATP synthase gamma chain [atpG]. 50 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lele46g1091 373 FunFam ATP synthase gamma chain, chloroplastic 51 118 - -
Lele46g1091 373 PRINTS ATP synthase gamma subunit signature 319 338 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lele46g1091 373 PRINTS ATP synthase gamma subunit signature 124 143 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lele46g1091 373 PRINTS ATP synthase gamma subunit signature 350 371 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lele46g1091 373 PRINTS ATP synthase gamma subunit signature 217 234 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1091 Lele-ChrLele46 18784571 18785692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1091 24 372 Primary Pumps ATPases AT1G15700 69.944 2.04e-178 499