Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1085 ATGAAAAAAATCCATCAATCGCTTTATAAATCATTAGTTGTCTCCAGCTCTGTGTCTCTCTTCCCCCATCGTCACTCTCACTGCTCTAACAATATGGCTGAGACTACACAAGTTGCTCCTAGTCCTGAATTGTTGGAATGGCCAAAGAAAGATAAGCGCCGCTTCCTTCATGCTGTCTACCGTGTCGGTGATCTTGATCGCACCATCAAGTTTTACACTGAAGCTTTTGGAATGAAGCTTTTGAGGAAAAGAGATGCTCCAGAGGAAAAATATTCCAATGCTTTTCTTGGATTTGGCTCTGAAGAAAACCATTTTGTTGTGGAGTTAACATATAATTATGGGGTGAGCTCCTATGACATTGGAACTGGCTTTGGACATTTTGCAATTGCAACTCCAGATGTTTACAAAATGGTTGAAGACATCCGGGCCAAGGGTGGAAACATCACTAGGGAACCTGGTCCAGTTAAGGGTGGGAGTACTGTCATTGCATTTGTGAAGGACCCTGATGGTTACATGTTTGAGATCATCCAAAGGGAATCAACCCCTGAGCCACTGTGTCAAGTAATGCTTCGTGTTGGTGATTTAGAGCGCTCGATTAAGTTCTATGAAAAGGCTTTGGGTATGAAGGTGGTAAAGAAAGTTGATAGACCTGAATACAAGTACACAATAGCCATGCTTGGGTATGCAGAGGAGCATGAGACAACTGTCTTGGAGTTGACATATAACTATGGTGTCACTGAATACACTAAGGGAAATGCATATGCGCAGGTTGCTATTGGCACTAATGATGTATACAAGAGTGCCGAGGTAGTCAACCATGTCATACAAGAGTTAGGAGGGAAGATTACTCGGCAACCAGGGCCAATTCCTGGCATTAACACAAAAATCACTTCTTTCTTGGATCCAGATGGCTGGAAAACTGTGCTGGTTGACAATGAAGACTTCCTGAAGGAATTGAAGTGA 963 0.4289 MKKIHQSLYKSLVVSSSVSLFPHRHSHCSNNMAETTQVAPSPELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTEAFGMKLLRKRDAPEEKYSNAFLGFGSEENHFVVELTYNYGVSSYDIGTGFGHFAIATPDVYKMVEDIRAKGGNITREPGPVKGGSTVIAFVKDPDGYMFEIIQRESTPEPLCQVMLRVGDLERSIKFYEKALGMKVVKKVDRPEYKYTIAMLGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAIGTNDVYKSAEVVNHVIQELGGKITRQPGPIPGINTKITSFLDPDGWKTVLVDNEDFLKELK 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1085 320 TIGRFAM glyox_I: lactoylglutathione lyase 185 315 IPR004361 GO:0004462|GO:0046872
Lele46g1085 320 TIGRFAM glyox_I: lactoylglutathione lyase 43 187 IPR004361 GO:0004462|GO:0046872
Lele46g1085 320 Gene3D - 181 320 IPR029068 -
Lele46g1085 320 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 184 312 IPR037523 -
Lele46g1085 320 ProSitePatterns Glyoxalase I signature 1. 187 208 IPR018146 GO:0004462|GO:0046872
Lele46g1085 320 ProSitePatterns Glyoxalase I signature 2. 121 133 IPR018146 GO:0004462|GO:0046872
Lele46g1085 320 CDD GlxI_Ni 56 176 - -
Lele46g1085 320 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 54 178 IPR037523 -
Lele46g1085 320 FunFam Lactoylglutathione lyase 51 180 - -
Lele46g1085 320 Gene3D - 26 180 IPR029068 -
Lele46g1085 320 FunFam Lactoylglutathione lyase 181 320 - -
Lele46g1085 320 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 185 311 IPR029068 -
Lele46g1085 320 PANTHER LACTOYLGLUTATHIONE LYASE 35 319 - -
Lele46g1085 320 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 187 306 IPR004360 -
Lele46g1085 320 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 56 175 IPR004360 -
Lele46g1085 320 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 53 179 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1085 Lele-ChrLele46 18737743 18741764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1085 187 311 Calmodulin-binding Proteins AT1G08110 28.667 5.61e-11 60.1