Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1084 ATGATGTTCGCTGTTTCGTCTTCTACTTCAACTGCGATTTCAACTTCTGGTTTCATTCCTCCGCAATTTGGTTTGTTTCGGATTTCTGAGAAACCCCATGTTTCATCCCGAGCTTTTAGCTTGTCTCAAAGACTCTGCTTGGGGAATACTGAATTCTGTAACGCTGAACCTCCACGGAAGGATTCAGTTGTTCCTCTTGCAGCAACCATCGTTGCTCCTGTGACCCACCGTCCATCCATCATGCATTTACCTTCAAATTTCTCCTTCAGTCCTTGTATAACCCAACCCCTACATGGTCATAGTGACAAGTGCTCACTCACCACTCTGCAAGGGTTCTTTCATTTCTCTAGTGAATTTCACTTGTTCTTGCACTGCTCTTCCTATAACCTTGTAAGAACTTCACCTATGAGTTCAGCATCCATCATAGTTATATATATACTATGGCTTGCATCAACATTGACCCTTTTACATGGAGCATCAAAGGAAGTAGCTTCAAACCCTGAAGTTGTGAATATTGGAGCTATTTTCACATTTAAAACTATAAATGGACGAGTTGCTAAAATTGCTATTGAAGCTGCAGAGAAAGATGTGAATTCCGATCCACGCATCCTTGGTGGACGCAAATTGTCCATAACCTTGCACGATTCAAACTTCAATGGTTTTCTTGGCTTCATTGGAGCGCTCAAGTTCTTGGAGAGGAACTCAGTTGCTATTATTGGTCCACAGAGTTCAGTAATGGCCCCTGTGCTCTCGCATTTGGCAAATGAACTCCATGTTCCTCTTCTGTCATTTACAGCTCTGGATCCTACCCTGTCACCTCTTCAGTACCCTTATTTTCTGCAAACAGCACCTAATGATCAATTCCAGATGACTGCAGTGGCAGACATGATTAGCTATTTTGGTTGGAGAGAAATTATTGCTATTTATAGTGATGATGATCAAAGTCGAAATGGTATTGCTGTATTGGGAGATAAACTTGCTGGAAAGCGCTGTAAGATATCTTACAAAGCACCGCTGCCCCCTGATCCAACTGCTAGTCGGAATGATATTACTATTCAGTTGACCAAGGTTCAAAGTATGGAGTCCAGAGTGATTGTTCTTCACACCTTCTCCAAGACAGGTCTCTTGGTTTTTGATGTGGCTCAAGAATTAGGAATGATGAATCAAGGTTATGTCTGGATAGCTTCTTCTTGGTTATCAACCGTTTTAGACTCACAGTCACCACTTTCTTTGAATACTTCTAACTCAATCCAAGGAGTTCTTACGCTTAGGCCTCACACCCCACAATCAAAAAGAAAACAGACCTTTATGTCCAGGTGGAACCAGATAAGTAATGGTTCAATTGGGTTGAATCCATATGGACTCTATGCTTATGATTCTGTTTGGATCGTTGCCCTTGCATTGAAATCATTTTTTGATCAGAATGGTAATCTTTCATTCTCTAACAATACAAATTTAAACAGTATGAGAGGGGAGACTCTGGATCTTGGTGCACTGAGCGTTTTTAATGGAGGGGACCAATTGCTTGATAACATACTGCGCATTAACACGACTGGATTGACAGGACCTATTCAATTTCGTTCAGATAGATCCCCCTTAAATCCATCATATGACATTCTCAATGTAATTAATGGTAGTTATAGGAAAATCGGGTACTGGTCTAATTATTCTGGGCTATCTGTTATTCCTCCTGAGAAACTTCACACTAAGCGAGCCAACCGGTCAATTTTAAACCAACATCTGTCCAACATAACTTGGCCTGGTGGTACAACAGAAAAGCCTAGGGGATGGATTTTTCCAAATAATGGAAGACAGCTAAGAATTGGTGTCCCCAATCGAGTTAGTTATCAGAACATGGTCTCACTAATAAATAGTACCAATAAAGTTCAAGGATACTGCATAGATGTCTTCCTGGCTGCTATTAAATTGCTACCTTATGCAGTTCCATACAAATTTGTTCTGTTTGGAGATGGACATGAGAACCCCAACTACTATGACCTTGTCAATAAAATTAATTCTGGTGTGTTTGATGCTGCTGTAGGTGACATTGCCATTGTCACTGACCGAACAAAGATTGTGGATTTTACTCAACCATATACAGAGTCAGGACTTGTTGTGGTCACAAAAGTAAAACAATTAAAGTCAAGTGCTTGGGCTTTCTTGCGACCTTTTACTCCATTAATGTGGGGTGTCACAGCTGTTTTCTTCCTTGTTGTTGGAGCAGTTGTGTGGATTCTTGAACATAGAACAAATGACGAGTTCCGGGGGCCTCCTAGGAAACAAATTGTTACAATTCTTTGGTTTAGCCTCTCCACCATGTTCTTTGCTCACAGAGAGAACACAGTTAGTGCACTTGGTCGTATTGTACTAATCATCTGGCTTTTTGTGGTTTTGGTAATCAATTCAAGCTATACTGCAAGCCTAACATCAATTCTCACTGTGCAACAACTTTCCTCACCAATAACAGGAATTGATACCTTGATAACCAGTAATGAACGTATAGGATTTCAAGTAGGATCATTTGCTCAAAACTATCTTACTCAGGAACTCAACATCCCAAAATATAGACTTATTGCTCTTGGTTCGCCGGAAGAATATGCTATCGCTCTCGAGAGGGGAACCGTCGCGGCTGTCATTGATGAACGACCATATGTAGAACTCTTCATGTCAAATCACTGCAAATTCTCCATTAGAGGCCAAGAGTTCACCAAAAGTGGATGGGGATTTGCCTTCCGAAGGGACTCTCCTTTATCCATTGACATGTCAACTGCCATTATGACTCTGTCTGAAAATGGTGAACTCCAGAAGATTCATGAGAGGTGGCTCTCGACAAGGGCTTGCGATTTTAAGATTACAGAGGAGGGATCTGAGCAACTTCAGTTAGAAAGCTTTTGGGGCCTGTTTATGTTATGTGGGATAGCAAGTCTCCTAGCGCTTCTTGTCTATTTCATCTTGATGATTCTCCGATTCTGCCGTGACTTCCCCAAAAATGGTGGCCCTTCTAATAATGGTGGCACCACCAGCTCATCGCGCATCCAGACGTTTCTTAGTTTTGCCGATGAAAAAGAAGACATGTCACAAAGAAAGCTTAAAAGAAAACGCAAGGATTTTTCATAG 3117 0.4132 MMFAVSSSTSTAISTSGFIPPQFGLFRISEKPHVSSRAFSLSQRLCLGNTEFCNAEPPRKDSVVPLAATIVAPVTHRPSIMHLPSNFSFSPCITQPLHGHSDKCSLTTLQGFFHFSSEFHLFLHCSSYNLVRTSPMSSASIIVIYILWLASTLTLLHGASKEVASNPEVVNIGAIFTFKTINGRVAKIAIEAAEKDVNSDPRILGGRKLSITLHDSNFNGFLGFIGALKFLERNSVAIIGPQSSVMAPVLSHLANELHVPLLSFTALDPTLSPLQYPYFLQTAPNDQFQMTAVADMISYFGWREIIAIYSDDDQSRNGIAVLGDKLAGKRCKISYKAPLPPDPTASRNDITIQLTKVQSMESRVIVLHTFSKTGLLVFDVAQELGMMNQGYVWIASSWLSTVLDSQSPLSLNTSNSIQGVLTLRPHTPQSKRKQTFMSRWNQISNGSIGLNPYGLYAYDSVWIVALALKSFFDQNGNLSFSNNTNLNSMRGETLDLGALSVFNGGDQLLDNILRINTTGLTGPIQFRSDRSPLNPSYDILNVINGSYRKIGYWSNYSGLSVIPPEKLHTKRANRSILNQHLSNITWPGGTTEKPRGWIFPNNGRQLRIGVPNRVSYQNMVSLINSTNKVQGYCIDVFLAAIKLLPYAVPYKFVLFGDGHENPNYYDLVNKINSGVFDAAVGDIAIVTDRTKIVDFTQPYTESGLVVVTKVKQLKSSAWAFLRPFTPLMWGVTAVFFLVVGAVVWILEHRTNDEFRGPPRKQIVTILWFSLSTMFFAHRENTVSALGRIVLIIWLFVVLVINSSYTASLTSILTVQQLSSPITGIDTLITSNERIGFQVGSFAQNYLTQELNIPKYRLIALGSPEEYAIALERGTVAAVIDERPYVELFMSNHCKFSIRGQEFTKSGWGFAFRRDSPLSIDMSTAIMTLSENGELQKIHERWLSTRACDFKITEEGSEQLQLESFWGLFMLCGIASLLALLVYFILMILRFCRDFPKNGGPSNNGGTTSSSRIQTFLSFADEKEDMSQRKLKRKRKDFS 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1084 1038 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 170 1010 - -
Lele46g1084 1038 CDD GluR_Plant 604 942 - -
Lele46g1084 1038 Gene3D - 188 534 - -
Lele46g1084 1038 SUPERFAMILY Periplasmic binding protein-like I 165 597 IPR028082 -
Lele46g1084 1038 Gene3D - 869 949 - -
Lele46g1084 1038 PIRSF IGluLR_plant 137 1037 IPR017103 -
Lele46g1084 1038 Pfam Ligand-gated ion channel 944 974 IPR001320 GO:0015276|GO:0016020
Lele46g1084 1038 MobiDBLite consensus disorder prediction 1016 1038 - -
Lele46g1084 1038 FunFam Glutamate receptor 717 847 - -
Lele46g1084 1038 SUPERFAMILY Periplasmic binding protein-like II 583 942 - -
Lele46g1084 1038 Gene3D - 717 849 - -
Lele46g1084 1038 FunFam Glutamate receptor 601 717 - -
Lele46g1084 1038 Gene3D - 285 559 - -
Lele46g1084 1038 FunFam Glutamate receptor 285 445 - -
Lele46g1084 1038 SMART GluR_14 607 944 IPR001320 GO:0015276|GO:0016020
Lele46g1084 1038 SMART AABind_6 605 945 IPR001638 -
Lele46g1084 1038 FunFam Glutamate receptor 843 946 - -
Lele46g1084 1038 Pfam Receptor family ligand binding region 188 543 IPR001828 -
Lele46g1084 1038 Pfam Bacterial extracellular solute-binding proteins, family 3 623 943 IPR001638 -
Lele46g1084 1038 Gene3D - 601 716 - -
Lele46g1084 1038 CDD PBP1_GABAb_receptor_plant 171 563 IPR044440 -
Lele46g1084 1038 MobiDBLite consensus disorder prediction 1017 1038 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1084 Lele-ChrLele46 18726751 18732183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1084 157 1036 Ion Channels AT2G17260 61.616 0.0 1137