LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele46g1061	ATGCTTCCTGGTTCGGGACTCGCGGTGAACCTTGGCCGCGTTATGGAATCTTCTGATATTAATAATAATAATCGGAAGGCCCTCGGTGAAGTTGATTTCTTCTCTAACCCAACAAGCAAGTCGTCGTCTTCATCAGCACCACCACCACCCCATCAAGATGTTAAAACCCTTACCAATATCTCTGTCAAGAAGGACATTCCTCAGACTCTACCAGTTTCTAGGTCTAATTTGGATATGAATATTGGTTTACAACTGCATACTGGTAATAATACCAAGAATGATCAATCTACGGTAGATGATCATGGCGTGTCGTCAGATGCAGATGATAAGCGAGCCAAGAGCAACGAGGTTGTTGGAAAAGGTTGTGAGGAGAAAAAACCGATGGCAGCGAGGCAGTTTCTGGAGCTTGGAGGTGGTATTGGCGGCGAAGCAGCAGAAGCTGATGACGACGAAGTGTCGAATTCGAGTTCAGATGAAAAAACTCAATCTGTTTCACCTGATCAGAACAACAACAACAATAATGGTAAAAGTATTGAGATAATGGGTAGGGAAGAGAGTCCAGCTGATTCAGAATCACAGAAAGCTTGTAAGCTTCAGAAACTGAACCCTTCTTCAAATTCCATTGATCAATCCACCACTACCACAGAAGCCACCATGAGAAAAGCTCGTGTCTCAGTTCGTGCTAGATCAGAAGCCCCCATGATCAGCGATGGTTGTCAATGGCGAAAATATGGACAAAAAATGGCGAAAGGAAACCCATGTCCTCGTGCTTATTACAGATGCACCATGGCTGTTGGTTGTCCTGTTCGCAAACAAGTTCAGCGTTGTGCAGAAGACAGGAGCATATTGGTAACAACATACGAAGGAAATCATAACCATCCGTTGCCTCCGGCAGCTATGGCGATGGCTTCGACGACGAGTGCCGCCGCGGGCATGTTACTGTCTGGTTCAATGTCAAGTCCAGAAGGGTTGATGAAGATGAACCCTAATATGTTGGCCAGAGCCATTCTTAACCCTACTGGTTCTCCAACCATGGCTACTCTTTCTGCTACAGCACCTTTCCCTACTGTCACATTGGACCTAACTCACAACGTAATGCAGTTTCAAAGCCATAATACGACACCGTTTCAGCTAGTTCAACCATTGTATAACCAGTCCAAATTTTCTGGCCTTCACTTGTCACAACAGGGTAGGCCAATTCAACAGCAATCTTCCCCCACGGTGGCTGACACCCTCAGTAACGCCGCCACTGCGATCACCGCCGACCCAAACTTCACGGCGGCTCTCGCGGCAGCTATCTCTTCCATCATCCGTGGTAATAATCATCAGAACAACAACGGTGATGGCAGTAGCAGCAATCCACATATTCTCAACAGTACTTCAATCAGCAGCTTTTCAGGGAATTAA	1407	0.4627	MLPGSGLAVNLGRVMESSDINNNNRKALGEVDFFSNPTSKSSSSSAPPPPHQDVKTLTNISVKKDIPQTLPVSRSNLDMNIGLQLHTGNNTKNDQSTVDDHGVSSDADDKRAKSNEVVGKGCEEKKPMAARQFLELGGGIGGEAAEADDDEVSNSSSDEKTQSVSPDQNNNNNNGKSIEIMGREESPADSESQKACKLQKLNPSSNSIDQSTTTTEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRSILVTTYEGNHNHPLPPAAMAMASTTSAAAGMLLSGSMSSPEGLMKMNPNMLARAILNPTGSPTMATLSATAPFPTVTLDLTHNVMQFQSHNTTPFQLVQPLYNQSKFSGLHLSQQGRPIQQQSSPTVADTLSNAATAITADPNFTAALAAAISSIIRGNNHQNNNGDGSSSNPHILNSTSISSFSGN	468

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele46g1061	468	MobiDBLite	consensus disorder prediction	99	124	-	-
	Lele46g1061	468	MobiDBLite	consensus disorder prediction	84	98	-	-
	Lele46g1061	468	MobiDBLite	consensus disorder prediction	157	179	-	-
	Lele46g1061	468	SUPERFAMILY	WRKY DNA-binding domain	228	296	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele46g1061	468	Gene3D	WRKY domain	220	297	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele46g1061	468	Pfam	WRKY DNA -binding domain	237	294	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele46g1061	468	SMART	WRKY_cls	235	295	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele46g1061	468	MobiDBLite	consensus disorder prediction	192	214	-	-
	Lele46g1061	468	MobiDBLite	consensus disorder prediction	84	124	-	-
	Lele46g1061	468	MobiDBLite	consensus disorder prediction	31	62	-	-
	Lele46g1061	468	ProSiteProfiles	WRKY domain profile.	230	296	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele46g1061	468	PANTHER	WRKY TRANSCRIPTION FACTOR 36-RELATED	128	448	IPR044810	GO:0003700
	Lele46g1061	468	MobiDBLite	consensus disorder prediction	140	214	-	-
	Lele46g1061	468	MobiDBLite	consensus disorder prediction	443	468	-	-
	Lele46g1061	468	FunFam	probable WRKY transcription factor 31	220	297	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele46g1061	Lele-ChrLele46	18572897	18575034	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele46g1061	22	448	WRKY Transcription Factor Family	AT1G62300	47.358	2.03e-115	348

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Lele46g1061		WRKY	2.8e-24	CL0274