Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1056 ATGACCATAAAAGCAAACACCAAATTCTTGGTTTGTCTTTTGTTTCTTTTTATGATTCTGATTCTCAGAGTCGAAGCTCACTGTATGTCTGGTTGCAAGCTTGCTTTAGCTTCGTACTACGTCTGGGTAGGCGCAAATCTCACGTACATAAGCGAAATCTTCGGCCAGGATATTACTGAGATTCTCAAGCACAATCCAACAATCCCCAATCCGGATTATGTTCGGAGCAACACCCGAATCAACGTACCGTTCAAGTGCGATTGCTTGAACGGCGTCTTCTTAGGTCACACTTTCACTTACAAAATCCAACCCGGCGATACGTACCGTAAAATTGCTCAGGAAGCTTTTTCTAGCCTGACGACCGAGGATTGGTTGGAGAGGGTGAACAGATATGAAGCTACAAACATACCGGTAGCCGTTGGGATTAACGTCACCGTCAATTGCTCATGCGGCGATAGGCGTGTGTCAAGGGACTATGGATTGTTTTTGACATACCCACTCCGCAGCGGCGACAAATTATCGGAGCTAGCGGCGGCTGCCGGTGTAACGGCGGGGATTATACAGAGGTATAATCCCGCCTCCGATTTCAACGCGGGAAGTGGACTGGTGTTTTTGCCGGCGAAAGATGAAAAGGGAAGCTTTTTACCTCTACAGAGTAGATCAGGTGAGTGGATACTACGCACAGTTTCAGTACTGCATCATGAAAGAATATCTGGAGGAGCCATTGCTGGAATATGTATTGGAGCAGTTTTTGGGGTCTTACTATTGGCACTTGTTCTATATAGGATCAAAAAGGTGGAAGAGGCTTCCCTTCTTCCTGAACTATCTCAAGATCAGTATCTCCAGATTAGACACAGTTCAGGAAGCAGCTTGGAGAAGGCTTCAGAATCTGTTGACGTGGCTTCTCCAAGGTTGAATGGAATCACAGTAGACAAGTCAGTAGAGTTCTCATATGAGGAGCTTGCCAAAGCTACCAATGGCTTTTCTATTTCTAATAAGATTGGTCAAGGTGGCTTTGGATCTGTTTACTACGCAGAGCTTCGAAATGAGAAAGCTGCAATTAAGAAGATGGATATGCAAGCTTCAAAAGAATTCCTTGCTGAACTCAAGGTTCTGACACATGTTCACCACTTGAACTTGGTACGCTTAATAGGATACTGTGTTGAGAGCTCTTTATTTTTGGTTTATGAGTTCGTTGAGAATGGAAATTTAGGACAACATTTACGTGGGTCAGGAAGAGAACCATTATCATGGTCAACTAGAGTTCAAATTGCCCTTGATGCAGCAAGAGGACTTGAATACATCCATGAACATACAGTTCCTGTCTACATTCATCGCGACATTAAATCAGCAAACATTTTGATTGATAAGAACTTTCATGCAAAGGTTGCAGATTTTGGCCTGACAAGACTTACTGAATATGGAAGTTCTTCACTTCATACACGACTTGTGGGCACATTTGGCTATATGCCTCCAGAATATGCGCAATACGGCGACGTTTCGGCCAAAATAGATGTATATGCTTTTGGAGTAGTGCTATATGAACTCATATCTGCTAAAAAAGCTATTGTGAAGACAAACGAGACTGTGAACGAATCAATAGGACTAGTTGCCTTGCTTTTGGTTGGTGAAATATTGCAGTTTGAAGAGGTTTTAGAGCAGCTAAATGACAAAGAACAGCTTCTTGAATTTGTTGATCCTAGGCTTGGTGCTGACTACCCTTTTGAATCAGTATATAAGGTGGCTCAACTTGCAAAAGCTTGCACACATGATAATCCACAACTAAGGCCAAGCATGAGATCAATCGTAGTTGCACTTATGACCCTTTCTTCTTCAACTGAAGATTGGGATGTTGGCTCCTTTTATGAAACCCAAGCTATGATGCATTTCATGGCTGGAAGATAG 1905 0.4289 MTIKANTKFLVCLLFLFMILILRVEAHCMSGCKLALASYYVWVGANLTYISEIFGQDITEILKHNPTIPNPDYVRSNTRINVPFKCDCLNGVFLGHTFTYKIQPGDTYRKIAQEAFSSLTTEDWLERVNRYEATNIPVAVGINVTVNCSCGDRRVSRDYGLFLTYPLRSGDKLSELAAAAGVTAGIIQRYNPASDFNAGSGLVFLPAKDEKGSFLPLQSRSGEWILRTVSVLHHERISGGAIAGICIGAVFGVLLLALVLYRIKKVEEASLLPELSQDQYLQIRHSSGSSLEKASESVDVASPRLNGITVDKSVEFSYEELAKATNGFSISNKIGQGGFGSVYYAELRNEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVESSLFLVYEFVENGNLGQHLRGSGREPLSWSTRVQIALDAARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTRLTEYGSSSLHTRLVGTFGYMPPEYAQYGDVSAKIDVYAFGVVLYELISAKKAIVKTNETVNESIGLVALLLVGEILQFEEVLEQLNDKEQLLEFVDPRLGADYPFESVYKVAQLAKACTHDNPQLRPSMRSIVVALMTLSSSTEDWDVGSFYETQAMMHFMAGR 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1056 634 SMART serkin_6 328 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g1056 634 Pfam Protein tyrosine and serine/threonine kinase 330 605 IPR001245 GO:0004672|GO:0006468
Lele46g1056 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Lele46g1056 634 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 11 620 IPR044812 GO:0019199|GO:0045087
Lele46g1056 634 FunFam PTI1-like tyrosine-protein kinase 3 399 620 - -
Lele46g1056 634 Gene3D Phosphorylase Kinase; domain 1 313 398 - -
Lele46g1056 634 SUPERFAMILY Protein kinase-like (PK-like) 307 606 IPR011009 -
Lele46g1056 634 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Lele46g1056 634 FunFam LysM receptor kinase 2 307 398 - -
Lele46g1056 634 Gene3D Transferase(Phosphotransferase) domain 1 399 625 - -
Lele46g1056 634 ProSiteProfiles Protein kinase domain profile. 328 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1056 Lele-ChrLele46 18521859 18529984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1056 10 634 Receptor kinase-like Gene Family AT3G21630 53.931 0.0 673
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele46g1056 PK_Tyr_Ser-Thr 1.3e-48 CL0016