Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1051 ATGGCGGCCACTCGTGTGGCTTTTTCTCTGTTTCTGCCAATCGCTTTGATATTTTCTTCTCTTCATCTTGCTTCAGCCAACACTGATGCTACTGATGTTCAAGCGCTTGCGGTTTTGTACAACGCTTTAAACAGCCCTTCTTGGCTAACTGGTTGGAAAATTGGTGGTGGTGATCCTTGTGGAGAGTCTTGGAAAGGGATAACATGTGAGGGCTCAGCCGTTGTTTCCATGTATGAGATGATATTGCACAACTGTTTGGGACTCAATGGGACTCTCGGATACCTGCTTTCAGACCTTATGTCACTGAGACGACTTGACTTAAGTGACAACAAGATCCATGACACACTCCCTTACCAGTTACCGCCGAATCTGACAAGCCTGAACCTTGCAAGAAATAACTTGAGTGGAAATCTTCCTTATTCCATTTCTGCCATGACTTCGCTCAATTATCTGAATGTGAGCCACAATGCACTTTCCCTTTCAATTGGAGACATTTTTGCCGACCTTGCTGATCTCAGTACCCTTGATCTATCATTCAACGACTTTTCTGGAGATCTTCCTCCCTCTTTTGGTTCATTGTCCAATCTTTCTTCTGCCTTTTTGCAGAACAATCAGTTGACTGGTTCTCTTAGTGTTCTTGTTGGTTTGCCTTTAGATACTTTAAATGTCGCGAACAACAATTTCACGGGATGGATACCTCATGAACTTAGTTCAATTCGTAATTTCATATCTGATGGGAACTCCTTTGACAATGGCCCTGCTCCTCCTCCTCCTCCTCCTCCCCATACAGTTGCCCCTCCTCCCAGAAGATCTTCCAGTGGCCATCACCATTCTGGATCTGGTTCTCATAAAGCACATGCTTCTAAATCTAACAACGAAGATGCTGATAGCCATAAGGGCTTATCATCTGGGGCTGTGATAGGCATTATTTTGGGTTCAGTTTTTGTAGCTGTTTTTGCGCTAGTTGCTCTTGCTTTATATATCCGAAAACATAAAAGGAAGGAAAAAGGTGTAAGAACATCCAATGGAAATCCTCCTCTTGGAACCAATAATGTGACTCCTCCAATGCAAGAACAGAGGGTAAAAAGTGCTGCTGCTGTTGTTACAGATCTGAAGCCTCCTCCTGCTGAAAAAGTGATAGCTGAGAGGGTTCCTTCGAAGAACGGGTCTGCTAGGCGGATAAAATCCCCTATAACTGCTACATCATACACAATTGCTACTCTCCAAAGTGCAACAAATAGCTTCAGTCAAGAATTTATTATCGGTGAAGGTTCTCTTGGTCGAGTTTATAGGGCCGAATTCCCTAATGGGAAGATCATGGCCATTAAGAAGATCGACAATGCAGCGCTGTCATTGCAGGAGGAAGACAACTTTCTTGAAGCTGTATCAAACATGTCACGCTTGCGGCATCCGAACATTGTTACACTAGCTGGATACTGTGCCGAGCATGGGCAGCGCCTTCTAGTTTATGAGTATATTGGTAATGGAAATCTACATGATATGCTCCATTTTGCTGAAGATAGCAGCAAGGCTTTATCTTGGAATGCTCGAGTTCGAATAGCACTTGGCACAGCTCGAGCTTTAGAGTACTTGCATGAAGTATGCTTGCCTTCTATTGTACATAGAAACTTCAAATCGGCAAACATATTACTCGATGAGGAGTTGAATCCTCACCTGTCTGATTGTGGTTTAGCTGCTTTAACGCCAAACACTGAACGACAGGTTTCAACTCAGATGGTTGGCTCATTTGGTTATAGTGCTCCTGAGTTTGCATTATCTGGAATCTACACAGTAAAAAGCGATGTTTACAGTTTTGGAGTGGTGATGTTAGAGCTATTGACGGGTCGGAAGCCCCTTGACAGTTCACGAGCCAGATCGGAGCAATCACTTGTGAGGTGGGCTACTCCCCAACTTCATGATATAGATGCCTTGGCCAAAATGGTAGATCCTGCTTTGAATGGCATGTATCCTGCAAAGTCGCTGTCACGCTTTGCCGATATTATTGCCCTCTGTGTTCAGCCGGAGCCTGAATTTCGACCTCCGATGTCTGAGGTTGTGCAAGCATTGGTCCGGCTAGTGCAAAGAGCGAGTGTGGTGAAACGCCGCCCGAGTGACGAATCTGGGTTTGGTTACAAAACCCCAGATCATGAAGCCTTTGACATGTCATTTTAA 2172 0.4452 MAATRVAFSLFLPIALIFSSLHLASANTDATDVQALAVLYNALNSPSWLTGWKIGGGDPCGESWKGITCEGSAVVSMYEMILHNCLGLNGTLGYLLSDLMSLRRLDLSDNKIHDTLPYQLPPNLTSLNLARNNLSGNLPYSISAMTSLNYLNVSHNALSLSIGDIFADLADLSTLDLSFNDFSGDLPPSFGSLSNLSSAFLQNNQLTGSLSVLVGLPLDTLNVANNNFTGWIPHELSSIRNFISDGNSFDNGPAPPPPPPPHTVAPPPRRSSSGHHHSGSGSHKAHASKSNNEDADSHKGLSSGAVIGIILGSVFVAVFALVALALYIRKHKRKEKGVRTSNGNPPLGTNNVTPPMQEQRVKSAAAVVTDLKPPPAEKVIAERVPSKNGSARRIKSPITATSYTIATLQSATNSFSQEFIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYIGNGNLHDMLHFAEDSSKALSWNARVRIALGTARALEYLHEVCLPSIVHRNFKSANILLDEELNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRARSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRPSDESGFGYKTPDHEAFDMSF 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1051 723 MobiDBLite consensus disorder prediction 247 299 - -
Lele46g1051 723 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 29 260 - -
Lele46g1051 723 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 381 492 - -
Lele46g1051 723 MobiDBLite consensus disorder prediction 251 267 - -
Lele46g1051 723 Gene3D Ribonuclease Inhibitor 29 255 IPR032675 -
Lele46g1051 723 Gene3D Phosphorylase Kinase; domain 1 378 492 - -
Lele46g1051 723 ProSiteProfiles Protein kinase domain profile. 415 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g1051 723 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Lele46g1051 723 Gene3D Transferase(Phosphotransferase) domain 1 493 702 - -
Lele46g1051 723 SUPERFAMILY L domain-like 30 241 - -
Lele46g1051 723 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 20 693 - -
Lele46g1051 723 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 493 703 - -
Lele46g1051 723 CDD STKc_IRAK 421 692 - -
Lele46g1051 723 Pfam Protein kinase domain 418 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g1051 723 SUPERFAMILY Protein kinase-like (PK-like) 394 689 IPR011009 -
Lele46g1051 723 Pfam Leucine rich repeat 122 182 IPR001611 GO:0005515
Lele46g1051 723 MobiDBLite consensus disorder prediction 333 354 - -
Lele46g1051 723 Pfam Leucine Rich repeat 100 114 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1051 Lele-ChrLele46 18463075 18467882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1051 145 723 Strubbelig Receptor Gene Family AT4G22130 73.024 0.0 825
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lele46g1051 Pkinase 1.3e-44 CL0016