Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1045 ATGTTTTTGATACTATCAGCTAGCGGTGAGGCGAGTGATCGTAATGGATCATCGGAAGAAGACATGGATGTGCTGAAGAATCTGATCGATCCGCTGGCAGACGACCAAGAACTGAAGGGCCAACTTCTTCGCAAATACAGCGGATGCCTAGGAAGTCTGAAGCAGGAATTCATGAAGAAGAGGAAGAAAGGGAAGCTTCCTAAAGAAGCAAGGCAACAACTTCTTGATTGGTGGAGCAGACACTATAAATGGCCTTACCCATCTGTACGTTTCATCTATTCTTCTTCCTTAGGGCACTTTCAATCTCTTTTTCATTCAATAAAGTACATTATTGGTCCAATAAAGCGGTTTGACGATGAACAGGAGTCACAGAAGCTGGCACTGGCAGAATCAACAGGACTGGATCAGAAGCAAATAAACAACTGGTTCATAAATCAAAGGAAGCGACATTGGAAACCATCAGAGGATATGCAATTCATGGTGGTGGATCCTTCTCATCGTCATCACCACTATTACATGGACACTGTTCTTGGCAATCCCTATCCAATGATCTAA 555 0.4324 MFLILSASGEASDRNGSSEEDMDVLKNLIDPLADDQELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSVRFIYSSSLGHFQSLFHSIKYIIGPIKRFDDEQESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVVDPSHRHHHYYMDTVLGNPYPMI 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1045 184 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 20 159 - -
Lele46g1045 184 SMART ELK_2 37 58 IPR005539 GO:0003677
Lele46g1045 184 SMART HOX_1 59 157 IPR001356 GO:0003677
Lele46g1045 184 ProSiteProfiles 'Homeobox' domain profile. 122 153 IPR001356 GO:0003677
Lele46g1045 184 Gene3D - 62 157 - -
Lele46g1045 184 SUPERFAMILY Homeodomain-like 123 166 IPR009057 -
Lele46g1045 184 ProSitePatterns 'Homeobox' domain signature. 128 151 IPR017970 GO:0000981|GO:0006355
Lele46g1045 184 ProSiteProfiles ELK domain profile. 37 57 IPR005539 GO:0003677
Lele46g1045 184 Pfam ELK domain 37 58 IPR005539 GO:0003677
Lele46g1045 184 Pfam Homeobox KN domain 122 149 IPR008422 GO:0003677|GO:0006355
Lele46g1045 184 CDD homeodomain 122 154 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1045 Lele-ChrLele46 18419107 18420180 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1045 13 183 Homeobox Transcription Factor Family AT1G62360 66.667 7.74e-66 204