Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1044 ATGGAGGAAGGTGGTTCTAAAGGGGCTTCTTCATGTGTGGGGGGTTTTGGGTGGAACAGTAACAATAGTGGTGGTGGGGGGTTGTGTGCATCATCTTCATCTCATCCAATGATGATGATGCCTTTTGTGACTAGTTGTGATAATGTTTCCCATCAAATTCCATTCAGTCCTAATCCTATGAATAATAATGCTCCTCCTCCCACACACACTACTATTACTACTCCTCCTCCTTTCCTTCTTCCTTTGCCTTCTTCTTGCACTCATAATATTACTTCTTCTTCTTCCAATCATCATCCCCAAAACCTCGCCAACAACAACGGTTCTGGCTTAGTCTCCTTTTTCATGGACCCCGCCGCCGCCAACAACAACAACAACACTAGCGCTTCTTCTTCTTCTGCTGCTGCTAAGGCGAAGATCATGGCTCATCCTCACTATCATCGTCTTTTGACTGCCTACGTTAATTGTCAAAAGGTTGGAGCGCCGCCGGAAGCGATGGCGAGGTTGGAGGTAGCATGTGCGTCTGCGTTGACAATGGCAGGCGGAGGAGGCGGCGACGGCGGGGAGTCGGGGTGTATCGGAGAAGATCCGGCACTGGATCAGTTTATGGAGGCATATTGTGAGATGCTGACTAAGTATGAGCAAGAACTCTCGAAACCCTTCAAGGAAGCTATGCACTTTCTTCATACCATCGAGTCTCAGTTCAAAGCTCTTGCTATTTCTTCTTCTTCAGACTTCGGTGATTAA 744 0.4758 MEEGGSKGASSCVGGFGWNSNNSGGGGLCASSSSHPMMMMPFVTSCDNVSHQIPFSPNPMNNNAPPPTHTTITTPPPFLLPLPSSCTHNITSSSSNHHPQNLANNNGSGLVSFFMDPAAANNNNNTSASSSSAAAKAKIMAHPHYHRLLTAYVNCQKVGAPPEAMARLEVACASALTMAGGGGGDGGESGCIGEDPALDQFMEAYCEMLTKYEQELSKPFKEAMHFLHTIESQFKALAISSSSDFGD 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1044 247 Pfam KNOX1 domain 136 173 IPR005540 GO:0003677|GO:0005634
Lele46g1044 247 SMART KNOX2_2 188 239 IPR005541 GO:0003677|GO:0005634
Lele46g1044 247 Pfam KNOX2 domain 191 237 IPR005541 GO:0003677|GO:0005634
Lele46g1044 247 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 123 242 - -
Lele46g1044 247 SMART KNOX1_2 133 177 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1044 Lele-ChrLele46 18414883 18416009 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1044 135 235 Homeobox Transcription Factor Family AT1G62360 71.287 1.46e-42 147