Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1043 ATGGCGATTCTGGAGCGACTAGTGAGAGCTTCTCGGCTATGGGGTTCAATTTCTTCTCTTAAAACCCTAACTCATCCTGCTCGCTCCCACCACATTTCCGGCCCTTTCTCTCACAAATCCGCGTTTTCGTCTGAGGTTTTCAGTTCTAGAGGTCTACCTGATGCCGCGGGACCGTATTCGTTGTTTCCAGTTGTGTTAGCTGGTATTTTTGGGGTTGGAGTTCTAGAAATGGCATTCGCGGATGCTAATGAGTCTGCAGATGAGGGTGGGAAAGAGACTGCCAAGATTGAACCTTCCTCGTCATCAGCCTCGCCTTCAAGTCATGAGGATTTGGAAGGAATTGCCAAGAAATTAAGGTCCCAAATAATGCTGAAACTTGTAAATAGAGGACTTTCAGCTGCTTCTCATCCTGATTTCACTGTTGCTGTTAAAGGTCAAAAGGTCAGCATCAAGTTCCAAATTCCTCCGGCATGTGAAGTTTCCCATCTTCTTGCCAATCTTGTTTCCCAACTTGGAGTGAAGGCTGAAGAGAATGGGGGTGGTTCAAATATGTTAATCCGTGCTTGGGACAGCACTGTTGCATGGCAACTTACCCTTAGTCGTCCCCCAAAGGATATACAAGGAAATCCAAGTGATGAAGATCTATGCATACTCATATATTATCCTATCATCAGCCCTGACAAAGCTGAGATTGAATTCATTAAGAATGGGAGCCTGAGTACTGAAGAGCTTGATGCTTTTGCAACCATTTTAGAAATAGCTGGCAAAAAGTTGGGACAAAGAAGAGCCCCATCTAGGAGACCAAGGGGAGAGACAGAAAAGGTTCCATCTGTAGAGAAATCTATATCAAGTCTTGAATCAATGGGAGTGAGAATTTATGGACTCAATGAACTTCACTCAAATGGTGAGATGTCTTGGGACAACATTGCTGGTTATGATAACCAGAAAAGAGAAATAGAAGATACAATACTATTAGCTTTACAAAGACCTGAAGTATATGATGATATTGCTCGTGGGACTCGACATAAGTATGAGACAACCAGGCCACGTGCTGTGCTCTTTGAAGGTCCACCAGGTACAGGGAAAACTTCTTGTGCTCGTGTTATTGCTAGCCAAGCGGGTGTCCCATTGCTGTATGTACCACTGGAGGTAGTCATGTCCAAATACTATGGTGAAAGTGAGAACTTGCTAGGGAAAGTTTTTTCTCTTGCAAACGAACTTCCCAAGGGTGCTCTTATTTTTCTGGACGAGATTGATTCTTTTGCTGCTGCCCGTGATAGGGAAATGCATGAAGCTACACGCAGGATATTGTCAGTCTTATTGCGACAGATTGATGGGTTTGAGCAAGATAAGAGAGTGATTGTCATTGGTGCTACAAACAGAAAGCAAGACCTTGATCCTGCTTTAATAAGTCGGTTTGATACTATGATCACTTTTGACCTGCCTGATCATGATAACCGTAAGGAGATAGCAGCCAAATATGCCAAGCACCTTTCAAAACCAGAATTAGATGAACTTGCAAGAGTTACAGAAGGCATGTCTGGAAGAGACATTAGAGATTTTTGCCTGCAAGCTGAAAGGTCCTGGGCATCAAAGATTATTCGAGGACAAGTATCTAAAGATGGAGATGAAGCTTGTCTTCCACCTCTGCAAGAATATATGGATAGTAGCTCCAATAGGCGAAAAGCATTGCTTAGTGCCGCAGCAAATCAGAGATTCCGAAGTTCTTCTCCCATTGGCAAAGGAAGCCAGTTAGATCTGATTTAA 1767 0.4341 MAILERLVRASRLWGSISSLKTLTHPARSHHISGPFSHKSAFSSEVFSSRGLPDAAGPYSLFPVVLAGIFGVGVLEMAFADANESADEGGKETAKIEPSSSSASPSSHEDLEGIAKKLRSQIMLKLVNRGLSAASHPDFTVAVKGQKVSIKFQIPPACEVSHLLANLVSQLGVKAEENGGGSNMLIRAWDSTVAWQLTLSRPPKDIQGNPSDEDLCILIYYPIISPDKAEIEFIKNGSLSTEELDAFATILEIAGKKLGQRRAPSRRPRGETEKVPSVEKSISSLESMGVRIYGLNELHSNGEMSWDNIAGYDNQKREIEDTILLALQRPEVYDDIARGTRHKYETTRPRAVLFEGPPGTGKTSCARVIASQAGVPLLYVPLEVVMSKYYGESENLLGKVFSLANELPKGALIFLDEIDSFAAARDREMHEATRRILSVLLRQIDGFEQDKRVIVIGATNRKQDLDPALISRFDTMITFDLPDHDNRKEIAAKYAKHLSKPELDELARVTEGMSGRDIRDFCLQAERSWASKIIRGQVSKDGDEACLPPLQEYMDSSSNRRKALLSAAANQRFRSSSPIGKGSQLDLI 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1043 588 MobiDBLite consensus disorder prediction 259 280 - -
Lele46g1043 588 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 303 527 IPR027417 -
Lele46g1043 588 ProSitePatterns AAA-protein family signature. 453 472 IPR003960 GO:0005524|GO:0016887
Lele46g1043 588 SMART AAA_5 348 483 IPR003593 -
Lele46g1043 588 MobiDBLite consensus disorder prediction 86 110 - -
Lele46g1043 588 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 298 526 - -
Lele46g1043 588 Gene3D - 296 501 IPR027417 -
Lele46g1043 588 Pfam ATPase family associated with various cellular activities (AAA) 352 480 IPR003959 GO:0005524|GO:0016887
Lele46g1043 588 CDD AAA 345 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1043 Lele-ChrLele46 18394870 18401286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1043 348 525 Calmodulin-binding Proteins AT3G56690 38.172 1.03e-26 114