Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1040 ATGAAACTCTCGAGATCACAGCAACGAGGTGTCTGCAAGGCCTTGTGTTGCAGCTGTAACAGCAGACTCAGCGTTTCTTCTTCCTCAGAATTAGAAGCTGCAGAAACCAGTTCTTCATCATCAGCTTCTGCAGCTGATAGGTTTCCTTCTGTTTCAAGCTTAGCTCACGCCATGGTTCAAGAGAGGCTTGATCAAATGATCAGAGATCAGAGAGAGAGATCCACGACCACGAGGCTTCATCATCATCATCATCAGAATCAGAATCATCAGTTGCAGAAGAGAAGAGAAGAAGATGGAGGAACCAAGTTCGTGGTGATGATGGCGATGGAGAAGAGTTCTTATGATCCAAGAGAGGATTTCAGAGAGTCGATAGTGGAGATGATAATGGTGAATCGGCTTCAAGACGCTAAAGAACTTCGAAGTCTGTTAAATTATTATGTTTCAATGAATTCACAAGAGTACCATAGTGTTATACTTGAGGTCTTTCATAAGGTTTGTTCTAATCTCTTCCTATCATCATCTAAATGCCGATATTAG 537 0.4209 MKLSRSQQRGVCKALCCSCNSRLSVSSSSELEAAETSSSSSASAADRFPSVSSLAHAMVQERLDQMIRDQRERSTTTRLHHHHHQNQNHQLQKRREEDGGTKFVVMMAMEKSSYDPREDFRESIVEMIMVNRLQDAKELRSLLNYYVSMNSQEYHSVILEVFHKVCSNLFLSSSKCRY 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1040 178 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 34 172 IPR038933 GO:0045892
Lele46g1040 178 ProSiteProfiles OVATE domain profile. 109 168 IPR006458 -
Lele46g1040 178 MobiDBLite consensus disorder prediction 72 95 - -
Lele46g1040 178 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 107 170 IPR006458 -
Lele46g1040 178 Pfam Transcriptional repressor, ovate 113 170 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1040 Lele-ChrLele46 18356504 18357040 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele46g1040 Ovate 1e-19 No_clan