Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1016 ATGGCCAGGGTAAGAGATAGAACGGAGGATTTTAAAGATGCTGTACGACAGAGTGCTCGCTCTTTGGGGTATGACGAGGCCAAATTGGCATCAGTCATGGCTTCTTTTATTATTCAGAAACCTCGGCAAAGGTCACCATTTACTAAAGCTGCATTGAAGACGCTTGAGAGTATTGGAGAATTGGACCAGTTCTTGTTGAAGCACAGAAAGGATTATACAGATCTGCACCGCACAACTGAACAAGAGAGAGATAGCATCGAACATGAAGTAAGCTATGTGATTGGCTCTGAGAAACTAGTTTCTGATCTTATTGGATGTATCACAGTATATACATTAGTTAGTACTTTTATTAAAACTTGCCAACAGCAAATTGATGTTCTCAAAAACAGTATTAATGATGAAGAGGTGAACTCAAAAGGTTGGCTTGGCATTGCAGCTGCAAAGTCTAACGCTGACACTATAGCCCACAAACATGGGGTGGTTCTAATTCTGAGTGAGAGACTCCATTTAGTAACTGCTCAGTTTGATCAGCTCAGAGCTGTACGCTTCCAGGATGCTATTAATAGAGCTATTCCACGAAGAAAACTTAAACGTATGACCACAATGGATTCTGCAGAAGCTTCAAACTCAGGCAATATGGAGCTCAGAGAACCTGAAGAATCACGCAATGAGCCTTTAAGAGTCCAACAGCAAATCTTGGATGATGAAACACGTGCCCTTCAGGTGGAATTGACTAGTCTTCTAGATGCAGTTCAAGAGACTGAAACAAAGATGGTGGAAATGTCTGCACTAAATCACTTATTATCTACCCATGTTTTGCAACAAGCTCAGCAAATTGAGCTCCTATACGATCAGGCGATTGAAGCTACCAAGAACGTGGAGTTTGGTAACAAAGAACTATCCCAAGCCATTCAGCGGAATAACAGCAGCAGGACATTTCTTGTGTTGTTTCTTTTTGCACTCACTTTTTCTGTTCTCTTTCTTGATTGGTACAGCTAA 999 0.4124 MARVRDRTEDFKDAVRQSARSLGYDEAKLASVMASFIIQKPRQRSPFTKAALKTLESIGELDQFLLKHRKDYTDLHRTTEQERDSIEHEVSYVIGSEKLVSDLIGCITVYTLVSTFIKTCQQQIDVLKNSINDEEVNSKGWLGIAAAKSNADTIAHKHGVVLILSERLHLVTAQFDQLRAVRFQDAINRAIPRRKLKRMTTMDSAEASNSGNMELREPEESRNEPLRVQQQILDDETRALQVELTSLLDAVQETETKMVEMSALNHLLSTHVLQQAQQIELLYDQAIEATKNVEFGNKELSQAIQRNNSSRTFLVLFLFALTFSVLFLDWYS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1016 332 Coils Coil 117 137 - -
Lele46g1016 332 Gene3D - 228 329 - -
Lele46g1016 332 PANTHER SYNTAXIN-18 113 332 - -
Lele46g1016 332 MobiDBLite consensus disorder prediction 198 224 - -
Lele46g1016 332 Pfam SNARE-complex protein Syntaxin-18 N-terminus 6 86 IPR019529 -
Lele46g1016 332 SUPERFAMILY SNARE fusion complex 248 304 - -
Lele46g1016 332 FunFam Syntaxin-81 like 235 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1016 Lele-ChrLele46 18133340 18137101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1016 65 332 SNARE and Associated Proteins AT1G51740 66.171 5.69e-109 316