Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1011 ATGGGGCTGATCAAGCTGCTCTTCATCATTCTATTAGTTGCAACCATGGCAGAAGTAGAAGCTCGAATATCCCTCGAAGGTTGTCTCGAAAAATGTGCAAATATAGAGATTCCATATCCATTTGGTGTGGGACGACAACGTAGTACTGGTCACAACTGTTTCTTGGAGGATTCATTTAATCTCACCTGCGACAACTCGACATCTAAACTACTCTACAGAGACAAGATCCAAATTTCTAGCATATCCCCAGAAGGAGGTCAAATGGAAATTCTCATGAATGTCTCTAAGATTTGCCAAAATAGCTCAGGAATAAGTTCATCACCATATCTTCGCACCCATGATTTCACCATTTCCAAAACTCAAAACAAGTTCGTAACTATTGGTTGCCACACTTTGGGCTTAACTAGGACCTTGAATAGCTTTCGGAACGATAGTTATTTAGGCGGCTGTGTAACGCTATGTGAAAAGCTTCCTCCTGAAGAGTTGAACGATAAAACTTGTTCAGGAACTGGATGTTGCCAGGTGGATATTCCTGATGGAATGAATCGTATGAGAATTACAGTTTCTACCGTTAACCTTACCAACGTGTCAAGTTTCAACAATTGCAGTTATGCTTTTGTTGCCAAACAGGACTGGTTCAAATTCAAGCTTGATTATCTTAATTACTTTCCACATGAGACGGCCCCTCTTTTCCTTGATTGGACGGTTTCAAATCGAACTTGTCAAAAAGGTTCGGGTTCGCGTTCGAGTTCGAGTGGTCACGGTCACTGCGCCTGCAAAAACAACACAGTTCTTGTTCGCTTTAACAATGATCGTTACAATTGCAAATGCAAAACTGGTTTTGAGGGAAATCCATATCATCCTGATGGATGTCGAGATGTTAATGAGTGCAACAGACCCAATAATTGCAGTATTTCAAGGCATGCTCTATGTCGCAATTTCGATGGTAGCTACAGCTGTTATTGTCCGCCTGGATACAAAGGCGACGGCTATGTTAATGGAACACACTGCACTCGATCTCAACAATACTTGCTCATTCTTATAGTAGCATTAAGCGGTGTTGTTTTCTTATTGGTTGTCTTCACACTAGTTTCCACATCTTGTTGGGTGCAAAAGCAAAGGACCTTGAAGCAAATCAGGCAAAGAAACTTTGAACAAAATGGAGGAAACTTGTTGCAACAACAAATTTCACAACAACAAAGCTACACTGAGAGAACCAAGATATACACAGAAATTGATCTCAAAAATGCCACAAACAACTTTGACGAAAGCAGAATCCTTGGTCGTGGAGGACAAGGCACAGTTTACAAAGGTATGTTACCAGACAACACACATGTTGCAATTAAAAAGTCCCGAGTTGGAGGAGACCCTCGTCAAATCAAAGATTTCATCAATGAAGTGTTTGTGCTTTCCCAGATAAATCATAGGAATGTGGTCAAAATCTTAGGGTGTTGTCTTGAAACTGAAGTTCCTTTGTTGGTTTATGAGTTTGTGGACAATGGTACTCTATTTGACCACATAGACTCATTAAAGAATGGACGTTCTATTGCATGGGAAACTCGATTAACAATAGCTGCAGAAACTGCTGAGGCTATTTCATACTTGCACTCTGCTGCTTCAATTCCAATTATTCACCGTGATATTAAATCTGCCAACATATTGTTAGACCACAATGATAGAGCAAAGATTTCTGATTTTGGAGCTTCAAGACTTGTTCCTATTGATGAAACTCAAGTTACAACTGTGGTTCAAGGGACACTAGGATACTTGGATCCAGAGTATCTCCACACAGGTCAGTTGAATGAGAAGAGTGATGTCTATAGCTTTGGGGTTGTGCTTGTGGAGTTACTCACTGGGAATAAAGCGGTTGCATTCAATAATAGGCCAGAACTGAGAAACTTGGTTATGTACTTTGTGTCTTCTATGAAAGAAAACCGCTTGTGGGAAATTCTTGATAGACAATTGGACCAGAAGAAGAATGCAAAGCAGCTTGAGGATGTAGCCTTATTGGCATTGAGGTGTCTTAGGGTTAATGGAGAAGAAAGGCCCACCATGAAAGAGGTTGCATTGGAGTTACAGAACATTATGATTGCCATGGAAATTCATCCTTGTGCCAAGGACAAGGCTATGAATGAAGAAGAAAGTGAATACTTACTTGGTCATATACCTAATGGATATGGGGATGATGATGCTAGTGCTAGCATTTCAATTGTTCCCAGTAACCATGATAGCATACAGAAGCAGATAGCATTTGGGATTTCAGATGGGCGATGA 2274 0.4055 MGLIKLLFIILLVATMAEVEARISLEGCLEKCANIEIPYPFGVGRQRSTGHNCFLEDSFNLTCDNSTSKLLYRDKIQISSISPEGGQMEILMNVSKICQNSSGISSSPYLRTHDFTISKTQNKFVTIGCHTLGLTRTLNSFRNDSYLGGCVTLCEKLPPEELNDKTCSGTGCCQVDIPDGMNRMRITVSTVNLTNVSSFNNCSYAFVAKQDWFKFKLDYLNYFPHETAPLFLDWTVSNRTCQKGSGSRSSSSGHGHCACKNNTVLVRFNNDRYNCKCKTGFEGNPYHPDGCRDVNECNRPNNCSISRHALCRNFDGSYSCYCPPGYKGDGYVNGTHCTRSQQYLLILIVALSGVVFLLVVFTLVSTSCWVQKQRTLKQIRQRNFEQNGGNLLQQQISQQQSYTERTKIYTEIDLKNATNNFDESRILGRGGQGTVYKGMLPDNTHVAIKKSRVGGDPRQIKDFINEVFVLSQINHRNVVKILGCCLETEVPLLVYEFVDNGTLFDHIDSLKNGRSIAWETRLTIAAETAEAISYLHSAASIPIIHRDIKSANILLDHNDRAKISDFGASRLVPIDETQVTTVVQGTLGYLDPEYLHTGQLNEKSDVYSFGVVLVELLTGNKAVAFNNRPELRNLVMYFVSSMKENRLWEILDRQLDQKKNAKQLEDVALLALRCLRVNGEERPTMKEVALELQNIMIAMEIHPCAKDKAMNEEESEYLLGHIPNGYGDDDASASISIVPSNHDSIQKQIAFGISDGR 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1011 757 FunFam Wall-associated receptor kinase 2 391 497 - -
Lele46g1011 757 ProSitePatterns Serine/Threonine protein kinases active-site signature. 543 555 IPR008271 GO:0004672|GO:0006468
Lele46g1011 757 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 20 700 IPR045274 GO:0007166
Lele46g1011 757 SMART egf_5 240 292 IPR000742 -
Lele46g1011 757 SMART egf_5 296 338 IPR000742 -
Lele46g1011 757 CDD EGF_CA 293 329 - -
Lele46g1011 757 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 311 322 IPR000152 -
Lele46g1011 757 CDD STKc_IRAK 427 695 - -
Lele46g1011 757 ProSiteProfiles Protein kinase domain profile. 421 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g1011 757 SMART egfca_6 293 338 IPR001881 GO:0005509
Lele46g1011 757 SUPERFAMILY EGF/Laminin 293 331 - -
Lele46g1011 757 Pfam Protein kinase domain 422 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g1011 757 SMART serkin_6 421 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g1011 757 Gene3D Plasmodium vivax P25 domain 231 344 - -
Lele46g1011 757 Pfam Wall-associated receptor kinase galacturonan-binding 28 89 IPR025287 GO:0030247
Lele46g1011 757 ProSiteProfiles EGF-like domain profile. 293 338 IPR000742 -
Lele46g1011 757 FunFam Wall-associated receptor kinase 2 498 716 - -
Lele46g1011 757 Gene3D Phosphorylase Kinase; domain 1 383 497 - -
Lele46g1011 757 Pfam Calcium-binding EGF domain 293 330 IPR001881 GO:0005509
Lele46g1011 757 ProSitePatterns Calcium-binding EGF-like domain signature. 293 320 IPR018097 GO:0005509
Lele46g1011 757 FunFam Fibrillin 2 288 334 - -
Lele46g1011 757 SUPERFAMILY Protein kinase-like (PK-like) 403 703 IPR011009 -
Lele46g1011 757 Gene3D Transferase(Phosphotransferase) domain 1 498 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1011 Lele-ChrLele46 17992747 17997180 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1011 3 757 Receptor kinase-like Gene Family AT1G21230 43.191 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Lele46g1011 Pkinase 2.1e-49 CL0016