Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1006 ATGTTCACTCCTACTAATAATAATTACAGCAACTATTGCTTCCCTTTCTCTTCTTCTTCGTCTTCATCTTCTTCTTCCTCTTCCTCTTTTTCTTTCCCTCTTCTTCATCATCCTTCAGCTTTTGAAAACAATGCTTCTTCTTCTTCGATGATGATGAATACCTTTTTCCATCATGATCATCTTTCTTCTCTCCCCTTCATACCCACTGTAATCCCAGAACCAGTATTAACCAATCATCTCGCTGCTGCGTCCTCAGACTATGATTGTGTGGTCGGGAAACAGCAGAACATTGCTCCCGATTGTAATGTCGTTTCTGGTAATTTCATCGCCAAGAAGCCTTCTAAGAAGGATAGGCACAGCAAGATTTACACATCTCAGGGTCTTAGAGATCGACGAGTGAGATTGTCCATTGAGATCGCTCGCAAGTTCTTCGATCTGCAAGACATGTTAGGGTTCGACAAAGCCAGCAATACTCTCAACTGGCTCTTCACCAAGTCCAAGAAAGCAATTCAAGAGCTCGAAGTTGCAGCTGGAAGCAAGAAGAAAAGCAACAGAAGAAACAGCAAAACCACCACCACCAAGAGCTTCTCTTCCTCCTCTGAGGAGTACTGCGAAGAAGTGGTTTCACCACAGAGGGCGGTGGATTCAGATTCTGGCAAGCCGACGACAAGGTCAGAGACGGAGAGGGCGAAGAAGGAGTCGAGGGAGAAGGCGAGGGCGAGGGCGAGGGAAAGGGCTAATCACAAGGGAAAGAGCTTAATGGAAGAGGCTAAAGAAACTGAAGATTGTACTACTGTAATCAAAAGGAAGATGATGAAGCAGCAGCCTTGTAATCTGATGAATTCTAATCCTCCCCAAAACCATCTTGTGATACCTAATCACCAGGAATTAGCAAGTTTCACCACCACCACCAACAACACTATCATTAATACGAGTCATGACTACTCAATATTCCCTAATTTGACTCCAAATTGGGACATTAATGGCCGCTCCAATTTCTGTGCTATAGCCAATATGAATCTGTCCACAGATCTTCAAATCTATGGGAAATCTTGGGAAGAGTGCAACAATCAGCGTCAACATTAG 1086 0.4401 MFTPTNNNYSNYCFPFSSSSSSSSSSSSSFSFPLLHHPSAFENNASSSSMMMNTFFHHDHLSSLPFIPTVIPEPVLTNHLAAASSDYDCVVGKQQNIAPDCNVVSGNFIAKKPSKKDRHSKIYTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLNWLFTKSKKAIQELEVAAGSKKKSNRRNSKTTTTKSFSSSSEEYCEEVVSPQRAVDSDSGKPTTRSETERAKKESREKARARARERANHKGKSLMEEAKETEDCTTVIKRKMMKQQPCNLMNSNPPQNHLVIPNHQELASFTTTTNNTIINTSHDYSIFPNLTPNWDINGRSNFCAIANMNLSTDLQIYGKSWEECNNQRQH 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1006 361 MobiDBLite consensus disorder prediction 176 257 - -
Lele46g1006 361 ProSiteProfiles R domain profile. 232 249 IPR017888 -
Lele46g1006 361 MobiDBLite consensus disorder prediction 189 205 - -
Lele46g1006 361 Pfam TCP family transcription factor 114 250 IPR017887 -
Lele46g1006 361 ProSiteProfiles TCP domain profile. 115 173 IPR017887 -
Lele46g1006 361 MobiDBLite consensus disorder prediction 219 257 - -
Lele46g1006 361 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 86 289 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1006 Lele-ChrLele46 17915408 17916760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1006 111 254 TCP Transcription Factor Family AT1G67260 43.038 2.11e-27 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele46g1006 TCP 2.2e-39 No_clan