Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0993 ATGGCTTTCCCTGATTATAATCGTAAGTCCGATATACGATTTCTTGGGTTTAGTTATGGGCCCACATTTGCAAAGCCCTCGGAATGGTACTATTGCATTTCAATCCTGTTAAAAAAGACCCATGAGAGTATCAACAACAGGCTCGCTCTTGTGATGAAGAGCGGCAAATATACCCTGGGTTATAAAACGGTTCTGAAGTCCCTTAGGAACTCTAAAGGGAAACTGATTATTATTGCCAACAACTGCCCACCTTTGAGGAAGTCAGAAATAGAATACTACGCTATGTTGGCGAAGGTTGGAGTTCATCATTACAATGGGAACAACGTTGACTTGGGCACTGCTTGTGGAAAGTATTTCAGAGTGTGCTGTCTCAGCATCGTTGATCCTGGTGATTCTGACATAATTAAGACTATGCCTGGCGATCAGTAG 429 0.4266 MAFPDYNRKSDIRFLGFSYGPTFAKPSEWYYCISILLKKTHESINNRLALVMKSGKYTLGYKTVLKSLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVCCLSIVDPGDSDIIKTMPGDQ 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0993 142 Gene3D - 37 138 IPR029064 -
Lele46g0993 142 PANTHER RIBOSOMAL PROTEIN L30 38 140 IPR039109 GO:0003723
Lele46g0993 142 FunFam 60S ribosomal protein L30 34 138 - -
Lele46g0993 142 SUPERFAMILY L30e-like 43 137 IPR029064 -
Lele46g0993 142 Hamap 50S ribosomal protein L30e [rpl30e]. 42 139 IPR000231 GO:0003723|GO:0003735|GO:0022625
Lele46g0993 142 ProSitePatterns Ribosomal protein L30e signature 2. 110 130 IPR022991 -
Lele46g0993 142 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 43 135 IPR004038 -
Lele46g0993 142 ProSitePatterns Ribosomal protein L30e signature 1. 54 78 IPR022991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0993 Lele-ChrLele46 17722919 17724898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0993 38 142 Cytoplasmic Ribosomal Protein Gene Family AT1G77940 88.571 1.86e-67 198
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g0993 46 17722919 17724898 Lele47g0484 47 3835170 3837347 hybridization