Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele46g0987 | ATGAGCTGTAATGGTTGTCGCGTTCTCCGAAAAGGTTGCAGTGAGAATTGTAGCATCAGACCTTGCTTGCAGTGGATAAAATCCCCTGAATCTCAAGCTAACGCCACTGTGTTTCTAGCTAAGTTCTATGGCCGGGCTGGTCTCTTGAACCTCATTAACGCTGGTCCTCAACACCTTCGTCCAGCTATTTTTCGGTCTTTGCTTTACGAAGCGTGCGGGCGGATACTTAACCCGATTTATGGGTCCGTGGGTCTGTTATGGTCCGGGGACTGGCAGCGTTGTCAGGTCGCCGTGGAGGCGGTGTTGAAGGGTAACCCGATCACTCCGATCAACTCGGAAGCTGCCGTGAGTGGGCAGGGTCCACCGCTGAAGCCTTACGACATACGTCATGTGTCCAAGGACAAGAACTCGACCGAGTCGAACGATGCCCAACGAGTCAAGTCTCGGTCACGGTTCAAGCCATCCGCTGGGAAGACCAAGAAGGCGAACAAGGGGACCGAGTTGAAGTCCGATGAACCGGAAGAACCGCGCAGTGGATGCACCGTGTGTTGTGCGGCCGTTGATGAGGTGGCGAACAGGTCCGCGAGCCACGAATCGTCGCTGAGTCACCAGTCGGAGGAGGCGCCGGCGAAGGCGGCATCGGCGGCGGCGGAAGGTGATAGCAAAGAGAGCGAGAGCATGATGTCGGTGGAGACGGCCGAGACTTCTATTCTCTTCCGAGACGAACCGGAATCAACACCCAAACAAAGCAAGGGAGCCGACGAAGCCGATGGGGCCGAATTGGGACTGGAGCTGACGCTGGGGTTCAAACCGGTGCCACGTGAGGCTCACGTGATGCCGGTCAAGAAAAGAAAGATAGAGTTTCAATTTCAGGACTCAGGTGGTGACTCAGCTAATAAGAAAGTGTCAAGCACGAAGCTGGGGCTGGAATGCTCGGCTTGA | 942 | 0.5563 | MSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLLNLINAGPQHLRPAIFRSLLYEACGRILNPIYGSVGLLWSGDWQRCQVAVEAVLKGNPITPINSEAAVSGQGPPLKPYDIRHVSKDKNSTESNDAQRVKSRSRFKPSAGKTKKANKGTELKSDEPEEPRSGCTVCCAAVDEVANRSASHESSLSHQSEEAPAKAASAAAEGDSKESESMMSVETAETSILFRDEPESTPKQSKGADEADGAELGLELTLGFKPVPREAHVMPVKKRKIEFQFQDSGGDSANKKVSSTKLGLECSA | 313 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele46g0987 | 313 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 38 | 1 | 266 | - | - | |
Lele46g0987 | 313 | MobiDBLite | consensus disorder prediction | 160 | 176 | - | - | |
Lele46g0987 | 313 | PIRSF | AS2 | 1 | 308 | IPR017414 | - | |
Lele46g0987 | 313 | MobiDBLite | consensus disorder prediction | 292 | 313 | - | - | |
Lele46g0987 | 313 | MobiDBLite | consensus disorder prediction | 194 | 259 | - | - | |
Lele46g0987 | 313 | MobiDBLite | consensus disorder prediction | 127 | 149 | - | - | |
Lele46g0987 | 313 | ProSiteProfiles | LOB domain profile. | 1 | 107 | IPR004883 | - | |
Lele46g0987 | 313 | MobiDBLite | consensus disorder prediction | 244 | 258 | - | - | |
Lele46g0987 | 313 | MobiDBLite | consensus disorder prediction | 290 | 313 | - | - | |
Lele46g0987 | 313 | MobiDBLite | consensus disorder prediction | 110 | 179 | - | - | |
Lele46g0987 | 313 | Pfam | Lateral organ boundaries (LOB) domain | 2 | 101 | IPR004883 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele46g0987 | Lele-ChrLele46 | 17693287 | 17694320 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele46g0987 | 1 | 286 | AS2 family | AT3G02550 | 56.993 | 7.76e-103 | 300 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Lele46g0987 | LOB | 1.1e-23 | No_clan |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele45g0906 | 45 | 19795937 | 19796943 | Lele46g0987 | 46 | 17693287 | 17694320 | ECH | |
Lele46g0987 | 46 | 17693287 | 17694320 | Lele46g0987 | 46 | 17693287 | 17694320 | ECH | |
Lele46g0987 | 46 | 17693287 | 17694320 | Lele47g0488 | 47 | 3862704 | 3863737 | hybridization | |
Lele46g0987 | 46 | 17693287 | 17694320 | Lele48g0508 | 48 | 4867615 | 4868648 | hybridization |