Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0931 ATGTTATTTCTAGATTTATTCTCCCAAAACTTGGTTGTCCTGAAAGAGAAGAGAATGGGTGATAGGTTGAAACAGAAACTTGCCATTGGAATTGATCTTGGAACCACATATTCATGTGTTGCAATATGGCAGCATGGTCGAGCAGAGATCATTGTTAATGATCAAGGGAACAGAACGACGCCGTCTTATGTTGCCTTCACTGATAGTCAAAGAATGGTTGGTGATGCTGCCAAAAATCTGGCTGCACATAACCCTGCTAACACTGTCTTTGATGCAAAGAGATTGATTGGTCGAAGATTTGATGATTCCCATGTTCAAAGTGATATAAACCTTTGGCCATTTAAGGTCATTTGTGGTAAAAATGATAAGCCCAAAATTGTTGTAAATTTTAAATCCCAAGAAAAGCAATTTCTACCTGAAGAAATCTCATCCATGGTATTAGCAAAGATGCATGAGATTGCAGAGACATATCTTGGTGCAACAGTTGAGAATGCAGTTGTCACTGTGCCTGCATATTTCAGTGACTCCCAACGTCAAGCAACCAAAGATGCAGGCACAATTGCTGGCCTTAACGTGATGCGAATAATCAATGAGCCAACTGCTGCAGCAATTGCATATGGTCTTGACAAGAAAGATAGCTATGACCAAGAGAGAAACATATTTGTCTTTGATCTTGGGGGTGGTACCTTTGATGTTTCTCTTGTCACAATAAAGAAGGGTGACTTTAAAGTTAAAGCAGTTGATGGAGACACTCACCTCGGGGGAGAGGACTTTGACAATAGAATGGTCAACTACTTTGTGGAAGAGTTGAAGAGGAAGCATAAGAAGGACATTAGTGGGAGTCCAAAGGCCCTTAGGAGGTTGAGAACTGCTTGTGAGAGAGCAAAAAGAGCACTCTCATCTGCATCCATTGTCGATACAATAGTTGAGGTTGATGCTTTATACGAGGGCTTTGACTTTTGTTCAATTATCACCCGTGCTAGGTTTGAGGAATTGAACAAAGACCTCTTCCAAAAGTGTTTGGAAATTACAGAGAAGTGTCTCATGGATGCTAAGATGGACAAGAGCAAGATTGATGAAGTTGTCCTTGTTGGTGGCTCTACTAGAATTCCTAAAGTTCAACAGCTATTACAGCACTTCTTAAATGGGAAGTATCTATGCAGGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCTGCTGTTCAAGCTGCCATATTAAGTGGGCAAGGAAACGAAGATTTACAGGGCATTGTCTTGAGAGATGTCACCCCATTGTCCTTAGGGTTTGAGACACATGGTGATATCATGCAAGTAGTAATTCCAAGGAACACTACTATTCCTACAAAGATGTGGGTTGATAATTGTACTACTGTGAGGGACAACCAAACAACAACCTCTTCTCATGTTTTTCAGGGTGAAAGAGCAAAGGCAAATGATAACAATTCGCTCGATTTATTTTACCTAACCACTCCCCCAGAGCCTAAGGGTGTTCCTAAGTTCAAAGTATGCTTTTCCATTGATGAGAATGGGATCTTAAATGTCTCTGCAAGGGAAACTAGAACTGGGAACGAGAATGGGATAACAATAACCAATAGAGAAGGAAGACTATCAAAAGAAGAGATTGAACGGATGGTTCAAGAAGCTGAGAAATACAAGGCTGATGATGAGAGGTACAAGAAGAAAGTTAAAGCAAAGAATGATTTGGAGGACTATATATATAAAATCAAGAGTGCAGTGCATAATCAGGTGGTTAGCTCAAAGCTTTCAGATGCTGACAAGAAGAAGATTGAGGATGCGATTGAAAGAGCCTCCAAGCTGGTTGATGACCAACAGCTTGCTGAAGTTGATGAGTACGAGCGTGAGATGACAGAGCTCAAGAGAGCCAAGATCATGTGA 1899 0.4102 MLFLDLFSQNLVVLKEKRMGDRLKQKLAIGIDLGTTYSCVAIWQHGRAEIIVNDQGNRTTPSYVAFTDSQRMVGDAAKNLAAHNPANTVFDAKRLIGRRFDDSHVQSDINLWPFKVICGKNDKPKIVVNFKSQEKQFLPEEISSMVLAKMHEIAETYLGATVENAVVTVPAYFSDSQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKKDSYDQERNIFVFDLGGGTFDVSLVTIKKGDFKVKAVDGDTHLGGEDFDNRMVNYFVEELKRKHKKDISGSPKALRRLRTACERAKRALSSASIVDTIVEVDALYEGFDFCSIITRARFEELNKDLFQKCLEITEKCLMDAKMDKSKIDEVVLVGGSTRIPKVQQLLQHFLNGKYLCRSINPDEAVAYGAAVQAAILSGQGNEDLQGIVLRDVTPLSLGFETHGDIMQVVIPRNTTIPTKMWVDNCTTVRDNQTTTSSHVFQGERAKANDNNSLDLFYLTTPPEPKGVPKFKVCFSIDENGILNVSARETRTGNENGITITNREGRLSKEEIERMVQEAEKYKADDERYKKKVKAKNDLEDYIYKIKSAVHNQVVSSKLSDADKKKIEDAIERASKLVDDQQLAEVDEYEREMTELKRAKIM 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0931 632 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 412 565 IPR029047 -
Lele46g0931 632 FunFam Heat shock 70 kDa 254 339 - -
Lele46g0931 632 FunFam Heat shock 70 kDa protein 411 566 - -
Lele46g0931 632 PANTHER HEAT SHOCK PROTEIN 70KDA 28 603 IPR013126 GO:0005524|GO:0140662
Lele46g0931 632 FunFam heat shock 70 kDa protein-like 90 145 - -
Lele46g0931 632 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 413 570 IPR029047 -
Lele46g0931 632 Gene3D - 566 632 IPR029048 -
Lele46g0931 632 Gene3D Actin; Chain A, domain 4 255 339 - -
Lele46g0931 632 PRINTS 70kDa heat shock protein signature 228 238 - -
Lele46g0931 632 PRINTS 70kDa heat shock protein signature 358 374 - -
Lele46g0931 632 PRINTS 70kDa heat shock protein signature 27 40 - -
Lele46g0931 632 PRINTS 70kDa heat shock protein signature 55 67 - -
Lele46g0931 632 PRINTS 70kDa heat shock protein signature 165 185 - -
Lele46g0931 632 PRINTS 70kDa heat shock protein signature 498 514 - -
Lele46g0931 632 PRINTS 70kDa heat shock protein signature 77 85 - -
Lele46g0931 632 PRINTS 70kDa heat shock protein signature 390 410 - -
Lele46g0931 632 PRINTS 70kDa heat shock protein signature 417 436 - -
Lele46g0931 632 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 565 628 IPR029048 -
Lele46g0931 632 ProSitePatterns Heat shock hsp70 proteins family signature 3. 361 375 IPR018181 -
Lele46g0931 632 Gene3D - 211 387 - -
Lele46g0931 632 SUPERFAMILY Actin-like ATPase domain 215 409 IPR043129 -
Lele46g0931 632 Gene3D - 29 405 - -
Lele46g0931 632 Coils Coil 542 562 - -
Lele46g0931 632 Gene3D - 90 145 - -
Lele46g0931 632 ProSitePatterns Heat shock hsp70 proteins family signature 2. 222 235 IPR018181 -
Lele46g0931 632 ProSitePatterns Heat shock hsp70 proteins family signature 1. 31 38 IPR018181 -
Lele46g0931 632 SUPERFAMILY Actin-like ATPase domain 27 210 IPR043129 -
Lele46g0931 632 Coils Coil 594 629 - -
Lele46g0931 632 FunFam Heat shock protein 70 29 221 - -
Lele46g0931 632 Pfam Hsp70 protein 28 628 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0931 Lele-ChrLele46 17106748 17110764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0931 28 627 Calmodulin-binding Proteins AT3G12580 69.384 0.0 852