Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0909 ATGATGATATCGAGGGGGCTGTTCGGATGGTCCCCACCCCATATACAGCCGCTCACGCCGGTGTCGGAGGTATCTGAGCCGCCAGAGTCGCCGTCGCCTTACTTAGACCCTGGAGCTGAGACCTCTGCTTCCCACCAGGTTGAAATGGAGGAGGAGATCGAGGAGCCCGAGGAGATTGAACCACCGCCCGCTGCGGTGCCCTTCTCCAGGCTCTTTGCTTGCGCCGACCGGCTCGATTGGGTTCTGATGGTCGTGGGCTCCCTGGCAGCAGCTGCTCATGGTACTGCACTCGTAGTTTATTTACACTACTTTGCGAAGATCATTAATGTGTTGAGGATGGATCCTTCGCAAGCTGAAACAGATTTGCTGGGTTCTGTTCGTTTTGGTTTGATTGGATTGGTTGTTGTGCTGTGCTTTGGGCATAACCTTCTAAATTCCTGCCATTCAAACTGTGAACCAGAATATGGTTATTTACTCTCATTGTTTCTTCTACAGCTTGCTTTAACCGTCGTTTATATCGCTGCGGGTGTTTTTGCTGCTGGTTGGATAGAGGTTTCATGCTGGATTTTGACTGGAGAACGGCAGACTGCTGTTATCAGATCAAAATATGTTCAAGTATTGCTTAACCAAGATATGAGTTTTTTTGATACATATGGGAATAATGGAGATATCGTGAGCCAAGTATTAAGTGATGTGCTGCTCATTCAGTCTGCACTTAGTGAAAAAGTTGGAAATTATATTCACAATATGGCTACGTTCTTCAGTGGACTTGTTATTGGATTTATCAACTGTTGGCAGATTGCATTGATAACATTAGCCACAGGTCCATTTATTGTTGCTGCTGGAGGAATATCAAATATATTCCTTCATAGGCTGGCAGAGAATATTCAAGATGCATATGCTGAAGCTGCTAGTATTGCTGAACAGGCGGTTTCTTATATCAGGACATTGTATGCATTTACAAATGAAACATTGGCTAAGTATTCATATGCGACATCACTTCAAGCTACTCTTAGATATGGTATCTTAATAAGTCTTGTTCAAGGGCTTGGTCTTGGATTTACGTATGGGCTTGCAATATGCTCGTGTGCTTTACAACTCTGGGTAGGAAGGTTCTTGGTTATGCATGACAAAGCTCATGGTGGTGAAATCATAACAGCTCTCTTTGCTGTAATTTTAAGTGGCCTGGGTTTGAATCAGGCAGCAACAAACTTCTACTCATTTGATCAAGGACGTATAGCTGCTTATAGATTGTATGAGATGATAAGCAGGTCATCCTCATCTGTTAATCATGATGGAACTGCCCCAGTTTTTGTGCAAGGGAATATAGAGTTTAGGAATGTTTATTTTAGCTATCTATCTCGTCCTGAAATCCCTATATTAAGTGGGTTTTATTTGACTGTTCCTGCTAAGAAAGCTGTGGCACTTGTCGGCAGAAATGGATCTGGAAAAAGTAGTATAATTCCACTCATGGAGCGGTTTTATGATCCCACATTAGGGGAGGTTCTTTTAGATGGTGAGAACATTAAGAATCTGAAACTGGAATGGCTAAGGAGCCAAATAGGACTAGTCACCCAGGAGCCTGCTTTGCTCAGCTTGAGTATAAGAGACAACATTGCTTATGGTCGGGATGCCACTATGGATCAAATTGAAGAGGCTGCCAAGATAGCCCATGCGCATACATTCATCAGCTCATTAGGGAAAGGTTACGACACACAGGTTGGAAGGGCTGGCTTAGCCTTGACAGAAGAACAGAAGATAAAGCTTTCTATTGCAAGAGCTGTGCTTTTAAATCCATCCATTCTTCTTCTTGATGAGGTAACTGGTGGCCTTGACTTTGAGGCTGAAAGGGCTGTTCAGGAGGCTTTGGATCTTCTAATGTTGGGGCGTTCAACAATAATAATTGCTCGAAGGCTTAGTCTTATAAGGAATGCTGATTATATAGCTGTTATGGAGGAAGGTCAACTTGTTGAAATGGGTACTCATGATGAATTATTGACCTTGGATGGCTTATATGCAGAGCTCCTTCGATGTGAAGAGGCAGCAAAACTTCCCAAGAGGATGCCTGTTCGAAACTACAAGGAGACTGCAGCTTTCCAAATTGAGAAGGATTCACCCTCAAGTCATAGCTTTAAAGAACCATCATCCCCAAAAATGATGAAGTCCCCTTCCCTTCAGAGAGTTTCTAATGTATTTCGGTCGTCAGATGGCATCTATAACTCACAGGAATCACCACATGTTCGGAGCCCACCACCAGAAAAGATGAATGGTCAGTCTATGGATGCTGCAGATAAGGAGCCTTCAATAAGAAGGCAGGACAGTTTTGAAAAGAGGCTACCAGAGTTGCCCAAAATTGATGTCCAGTCTGTGCATCGACAAAAATCTAATGGTTCTGACCCAGAATCCCCTGTTTCACCTCTTTTAACGTCTGATCCCAAGAATGAGCGCTCCCACTCACAGACTTTTAGTAGACCCCATAGTGATTCTGATGATTTTTCATTGAAACTGAGAGAACCAAAAGATACAAAGCATCGAAAACCTCCATCATTTTGGAGACTCGCTAAACTTAGTTTTGCAGAGTGGCTTTATGCTGTGTTAGGAAGCATAGGTGCTGCCATCTTTGGTTCTTTCAATCCTCTTCTTGCATATGTTATTGGTCTGGTGGTGACAGCTTACTATAGAATTGATGAAGTTCATCACCTCCGGCAGGAGGTAGATAAGTGGTGCTTGATTATTGCCTGCATGGGCATTGTGACAGTTGTTGCCAACTTCTTACAACATTTCTACTTTGGTATTATGGGGGAGAAAATGACTGAAAGAGTTAGGAGAATGATGTTCTCGGCCATGCTACGCAATGAAGTGGGTTGGTTTGATGAAGAGGAAAACAGTGCTGACAATTTATCCATGCGTTTGGCCAATGATGCTACATTTGTACGAGCTGCTTTTAGCAACCGTCTTTCCATATTTATACAGGACAGTGCTGCAGTTATTGTTGCTGTTCTTATTGGTGCATTGCTGCACTGGCGATTAGCACTTGTGGCATTAGCAACATTTCCCATTCTCTGTGTTTCTGCAATTGCCCAGAAATTGTGGCTTGCTGGATTTTCAAGGGGCATACAGGAAATGCACAGAAAGGCATCTTTGGTTCTTGAAGACGCAGTTAGAAATATTTACACTGTTGTAGCATTTTGTGCTGGCAATAAGGTAATGGAACTCTATAGGTTGCAGCTGAAGAAAATATTTAAGCAGAGCTTTTTGCATGGGATGGCCATTGGTTTTGCATTTGGCTTTTCACAGTTTCTACTTTTTGCTTGTAATGCCCTTTTGCTTTGGTACACTGCCATATGCATAAAAAACAGTTATATGGATCCACCTACTGCTCTCAAGGAATATATGATCAGGTGGGAAGCTCTTGAGTGGCGAAGAATTTGTAACATTCAGGCAGCTGTCGGCATTGGCAGGCTATAG 3468 0.4305 MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDPGAETSASHQVEMEEEIEEPEEIEPPPAAVPFSRLFACADRLDWVLMVVGSLAAAAHGTALVVYLHYFAKIINVLRMDPSQAETDLLGSVRFGLIGLVVVLCFGHNLLNSCHSNCEPEYGYLLSLFLLQLALTVVYIAAGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGFINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVMHDKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLYEMISRSSSSVNHDGTAPVFVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATMDQIEEAAKIAHAHTFISSLGKGYDTQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMEEGQLVEMGTHDELLTLDGLYAELLRCEEAAKLPKRMPVRNYKETAAFQIEKDSPSSHSFKEPSSPKMMKSPSLQRVSNVFRSSDGIYNSQESPHVRSPPPEKMNGQSMDAADKEPSIRRQDSFEKRLPELPKIDVQSVHRQKSNGSDPESPVSPLLTSDPKNERSHSQTFSRPHSDSDDFSLKLREPKDTKHRKPPSFWRLAKLSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLVVTAYYRIDEVHHLRQEVDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVLIGALLHWRLALVALATFPILCVSAIAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFKQSFLHGMAIGFAFGFSQFLLFACNALLLWYTAICIKNSYMDPPTALKEYMIRWEALEWRRICNIQAAVGIGRL 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0909 1155 MobiDBLite consensus disorder prediction 18 60 - -
Lele46g0909 1155 Pfam ABC transporter transmembrane region 870 1126 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele46g0909 1155 Pfam ABC transporter transmembrane region 88 393 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele46g0909 1155 PANTHER ABC TRANSPORTER B FAMILY 49 876 - -
Lele46g0909 1155 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 443 678 IPR003439 GO:0005524
Lele46g0909 1155 Pfam ABC transporter 464 608 IPR003439 GO:0005524
Lele46g0909 1155 SUPERFAMILY ABC transporter transmembrane region 71 418 IPR036640 GO:0005524|GO:0016020
Lele46g0909 1155 MobiDBLite consensus disorder prediction 736 847 - -
Lele46g0909 1155 FunFam ABC transporter B family member 6 805 1033 - -
Lele46g0909 1155 Gene3D ABC transporter type 1, transmembrane domain 70 695 IPR036640 GO:0005524|GO:0016020
Lele46g0909 1155 MobiDBLite consensus disorder prediction 701 724 - -
Lele46g0909 1155 CDD ABC_6TM_Pgp_ABCB1_D1_like 83 418 - -
Lele46g0909 1155 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 84 410 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele46g0909 1155 MobiDBLite consensus disorder prediction 817 847 - -
Lele46g0909 1155 Gene3D ABC transporter type 1, transmembrane domain 834 1133 IPR036640 GO:0005524|GO:0016020
Lele46g0909 1155 FunFam ABC transporter B family member 20 433 680 - -
Lele46g0909 1155 MobiDBLite consensus disorder prediction 764 788 - -
Lele46g0909 1155 Gene3D - 433 680 IPR027417 -
Lele46g0909 1155 MobiDBLite consensus disorder prediction 789 816 - -
Lele46g0909 1155 Coils Coil 289 309 - -
Lele46g0909 1155 MobiDBLite consensus disorder prediction 698 724 - -
Lele46g0909 1155 SUPERFAMILY ABC transporter transmembrane region 853 1127 IPR036640 GO:0005524|GO:0016020
Lele46g0909 1155 SMART AAA_5 470 848 IPR003593 -
Lele46g0909 1155 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 865 1128 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele46g0909 1155 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 432 677 IPR027417 -
Lele46g0909 1155 CDD ABC_6TM_Pgp_ABCB1_D2_like 854 1155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0909 Lele-ChrLele46 16772342 16783930 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0909 53 736 Calmodulin-binding Proteins AT2G36910 42.878 7.45e-167 526